Strain Fitness in Pseudomonas simiae WCS417 around PS417_21130

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
4,596,969	+		PS417_21125	0.29	+5.4
4,596,989	-		PS417_21125	0.32	+5.4
4,597,080	+		PS417_21125	0.44	+7.1
4,597,081	-		PS417_21125	0.44	+5.0
4,597,255	+		PS417_21125	0.68	+6.4
4,597,257	+		PS417_21125	0.68	+2.5
4,597,257	+		PS417_21125	0.68	+6.1
4,597,257	+		PS417_21125	0.68	+7.6
4,597,257	+		PS417_21125	0.68	+5.2
4,597,258	-		PS417_21125	0.68	+4.8
4,597,329	+		PS417_21125	0.78	+3.1
4,597,329	+		PS417_21125	0.78	+6.4
4,597,488	+				-0.8
4,597,507	+				-0.3
4,597,507	+				-0.3
4,597,508	-				+0.1
4,597,617	-				-0.4
4,597,617	-				+0.4
4,597,648	+				+1.5
4,597,648	+				-0.1
4,597,648	+				+0.5
4,597,752	+				-0.0
4,597,757	-				-1.1
4,597,788	+				+0.4
4,597,789	-				+0.4
4,597,798	-				-0.6
4,597,844	-				-0.4
4,598,165	+		PS417_21130	0.13	+0.2
4,598,165	+		PS417_21130	0.13	-0.4
4,598,166	-		PS417_21130	0.13	-0.8
4,598,186	+		PS417_21130	0.15	+1.1
4,598,186	+		PS417_21130	0.15	-0.9
4,598,186	+		PS417_21130	0.15	+0.3
4,598,186	+				+1.2
4,598,249	+		PS417_21130	0.19	-2.3
4,598,249	+		PS417_21130	0.19	-0.2
4,598,273	+		PS417_21130	0.20	-0.1
4,598,274	-		PS417_21130	0.20	-0.3
4,598,274	-		PS417_21130	0.20	+1.2
4,598,274	-		PS417_21130	0.20	-0.6
4,598,275	+		PS417_21130	0.20	-0.2
4,598,275	+		PS417_21130	0.20	-0.7
4,598,275	+		PS417_21130	0.20	+0.1
4,598,276	-		PS417_21130	0.20	-1.6
4,598,276	-		PS417_21130	0.20	+0.6
4,598,276	-		PS417_21130	0.20	-0.3
4,598,400	-		PS417_21130	0.28	-1.4
4,598,459	+		PS417_21130	0.32	+2.6
4,598,547	-		PS417_21130	0.38	+0.3
4,598,630	+		PS417_21130	0.44	+0.1
4,598,631	-		PS417_21130	0.44	+0.7
4,598,701	+		PS417_21130	0.48	+1.1
4,598,701	+		PS417_21130	0.48	-1.8
4,598,736	-		PS417_21130	0.50	-0.6
4,599,047	+		PS417_21130	0.71	-0.4
4,599,047	+		PS417_21130	0.71	-0.2
4,599,140	+		PS417_21130	0.77	-0.7
4,599,141	-		PS417_21130	0.77	+0.6
4,599,141	-		PS417_21130	0.77	-0.7
4,599,179	+		PS417_21130	0.79	+1.9
4,599,180	-		PS417_21130	0.79	+0.4
4,599,180	-		PS417_21130	0.79	-0.4
4,599,242	+		PS417_21130	0.84	-0.4
4,599,242	+		PS417_21130	0.84	+0.3
4,599,242	+		PS417_21130	0.84	+0.9
4,599,242	+		PS417_21130	0.84	-0.7
4,599,242	+		PS417_21130	0.84	+0.0
4,599,243	-		PS417_21130	0.84	+0.1
4,599,243	-		PS417_21130	0.84	-0.3
4,599,243	-		PS417_21130	0.84	-0.2
4,599,270	-		PS417_21130	0.85	-0.3
4,599,272	+		PS417_21130	0.85	+1.3
4,599,292	-		PS417_21130	0.87	-0.1
4,599,292	-		PS417_21130	0.87	+0.2
4,599,398	-				+0.1
4,599,413	+				+0.0
4,599,413	+				-0.1
4,599,414	-				+0.2
4,599,443	+				-0.2
4,599,491	+				+0.2
4,599,513	-				-0.3
4,599,618	+		PS417_21135	0.15	+0.0
4,599,657	+		PS417_21135	0.21	-0.6
4,599,658	-		PS417_21135	0.21	+0.6
4,599,658	-		PS417_21135	0.21	-1.4
4,599,658	-		PS417_21135	0.21	+0.3
4,599,834	+		PS417_21135	0.46	-0.3
4,599,903	+		PS417_21135	0.55	-1.0
4,599,904	-		PS417_21135	0.55	+0.2
4,599,904	-		PS417_21135	0.55	+0.8
4,599,904	-		PS417_21135	0.55	-0.0
4,600,179	+				-0.4
4,600,302	+		PS417_21140	0.11	-0.0
4,600,302	+		PS417_21140	0.11	+0.2
4,600,303	-		PS417_21140	0.11	+0.6
4,600,344	-		PS417_21140	0.15	-1.0