Strain Fitness in Pseudomonas simiae WCS417 around PS417_20065

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
4,353,322	-		PS417_20060	0.27	-0.8
4,353,447	+		PS417_20060	0.36	-0.3
4,353,447	+		PS417_20060	0.36	-0.0
4,353,448	-		PS417_20060	0.36	-0.3
4,353,543	+		PS417_20060	0.43	-2.1
4,353,543	+		PS417_20060	0.43	-0.7
4,353,543	+		PS417_20060	0.43	-0.3
4,353,728	+		PS417_20060	0.57	-0.6
4,353,729	-		PS417_20060	0.57	-0.7
4,353,738	-		PS417_20060	0.58	-0.4
4,353,749	-		PS417_20060	0.59	-0.8
4,354,113	+		PS417_20060	0.86	-0.2
4,354,114	-		PS417_20060	0.86	-0.9
4,355,039	+				-0.1
4,355,039	+				-0.6
4,355,040	-				+1.4
4,355,040	-				-0.3
4,355,040	-				-0.6
4,355,040	-				-0.2
4,355,041	+				-0.2
4,355,084	+				-1.0
4,355,157	+				+0.5
4,355,158	-				+0.2
4,355,158	-				+0.3
4,355,240	+				-0.6
4,355,243	+				-0.4
4,355,244	-				-0.7
4,355,244	-				-0.3
4,355,337	+				-1.2
4,355,400	+		PS417_20070	0.12	-0.0
4,355,431	+		PS417_20070	0.18	+0.9
4,355,475	+		PS417_20070	0.26	-0.1
4,355,475	+		PS417_20070	0.26	-0.2
4,355,475	+		PS417_20070	0.26	-0.8
4,355,476	-		PS417_20070	0.26	+0.6
4,355,761	-		PS417_20070	0.79	+0.7