Strain Fitness in Pseudomonas simiae WCS417 around PS417_18575

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
4,033,748	+		PS417_18570	0.85	-0.5
4,033,748	+		PS417_18570	0.85	+0.6
4,033,748	+		PS417_18570	0.85	-1.3
4,033,748	+		PS417_18570	0.85	-0.3
4,033,749	-		PS417_18570	0.85	+0.2
4,033,749	-		PS417_18570	0.85	+0.6
4,033,810	-		PS417_18570	0.88	-0.1
4,033,810	-		PS417_18570	0.88	+0.5
4,034,068	+				+0.1
4,034,269	-				-0.2
4,034,269	-				+0.8
4,034,293	-				-0.8
4,034,328	-				+0.6
4,034,355	-				+0.0
4,034,420	+		PS417_18575	0.13	-0.7
4,034,421	-		PS417_18575	0.13	-0.8
4,034,424	+		PS417_18575	0.13	-0.3
4,034,424	+		PS417_18575	0.13	+0.6
4,034,424	+		PS417_18575	0.13	-0.3
4,034,424	+		PS417_18575	0.13	-0.4
4,034,425	-		PS417_18575	0.13	-0.7
4,034,652	-		PS417_18575	0.36	-0.9
4,034,652	-		PS417_18575	0.36	-1.2
4,034,674	+		PS417_18575	0.38	-0.3
4,034,674	+		PS417_18575	0.38	-1.2
4,034,675	-		PS417_18575	0.38	-1.2
4,034,675	-		PS417_18575	0.38	-0.5
4,034,675	-		PS417_18575	0.38	+0.5
4,034,695	+		PS417_18575	0.40	-1.1
4,035,181	+		PS417_18575	0.88	-0.0
4,035,231	-				-0.3
4,035,366	-				-3.6