Strain Fitness in Pseudomonas simiae WCS417 around PS417_17265

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
3,768,921	-				+2.8
3,768,957	+				+0.1
3,768,958	-				+0.6
3,768,958	-				+0.0
3,768,959	+				+0.4
3,768,959	+				-0.9
3,768,959	+				-0.2
3,768,959	+				-0.1
3,768,959	+				+0.1
3,768,959	+				-0.1
3,768,960	-				+0.6
3,768,960	-				-0.3
3,768,960	-				+0.0
3,768,960	-				+0.8
3,768,961	+				+1.2
3,768,961	+				-0.8
3,768,962	-				-0.4
3,768,962	-				+0.4
3,768,962	-				-2.1
3,768,962	-				+0.1
3,768,962	-				-0.5
3,768,962	-				+0.3
3,768,964	-				+0.3
3,768,964	-				+1.3
3,769,040	-				+0.8
3,769,043	+				+0.0
3,769,043	+				-0.2
3,769,044	-				+0.1
3,769,044	-				-0.8
3,769,044	-				-0.0
3,769,044	-				-2.2
3,769,044	-				-0.1
3,769,044	-				+0.8
3,769,047	+				+1.4
3,769,048	-				+0.0
3,769,079	-				-0.2
3,769,096	-				+0.2
3,769,134	+				-0.1
3,769,234	+				+1.6
3,769,305	+				-0.4
3,769,305	+				+0.3
3,769,306	-				+0.2
3,769,429	-				+0.1
3,770,814	-				-1.4
3,770,869	+				+0.6
3,770,899	-				-0.2
3,771,008	-				-0.9
3,771,008	-				-0.8
3,771,008	-				-0.6
3,771,132	+		PS417_17270	0.17	-1.2
3,771,132	+		PS417_17270	0.17	-0.5
3,771,229	-		PS417_17270	0.27	-0.9
3,771,229	-		PS417_17270	0.27	-0.3
3,771,229	-		PS417_17270	0.27	+0.3
3,771,450	+		PS417_17270	0.51	-0.7
3,771,450	+		PS417_17270	0.51	-1.4
3,771,451	-		PS417_17270	0.51	-0.5
3,771,594	+		PS417_17270	0.67	-0.6