Strain Fitness in Pseudomonas simiae WCS417 around PS417_16200

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
3,549,867	+				+1.0
3,549,868	-				+0.0
3,549,916	+				+0.2
3,550,234	-				-0.2
3,550,341	+		PS417_16195	0.49	-2.1
3,550,777	+				-0.2
3,550,778	-				+1.5
3,550,853	-				+0.2
3,550,912	+				-1.3
3,550,912	+				-0.1
3,550,913	-				-0.2
3,550,918	+		PS417_16200	0.10	-0.6
3,550,918	+		PS417_16200	0.10	+0.1
3,550,918	+				-0.6
3,550,919	-				-0.6
3,550,919	-		PS417_16200	0.10	+1.1
3,550,919	-				+0.0
3,550,919	-		PS417_16200	0.10	+0.5
3,550,919	-		PS417_16200	0.10	-0.1
3,551,014	+		PS417_16200	0.20	-0.8
3,551,014	+		PS417_16200	0.20	-0.0
3,551,015	-		PS417_16200	0.20	+1.1
3,551,015	-		PS417_16200	0.20	-0.1
3,551,015	-		PS417_16200	0.20	-1.1
3,551,015	-		PS417_16200	0.20	-0.2
3,551,015	-		PS417_16200	0.20	-0.3
3,551,047	-		PS417_16200	0.23	-0.2
3,551,047	-		PS417_16200	0.23	+0.2
3,551,089	+		PS417_16200	0.27	-0.4
3,551,090	-		PS417_16200	0.27	+0.9
3,551,128	+		PS417_16200	0.31	+0.4
3,551,167	+		PS417_16200	0.35	-0.0
3,551,324	-		PS417_16200	0.51	+0.2
3,551,464	+		PS417_16200	0.65	+0.8
3,551,465	-		PS417_16200	0.65	-0.0
3,551,465	-		PS417_16200	0.65	+0.1
3,551,465	-		PS417_16200	0.65	+0.2
3,551,465	-		PS417_16200	0.65	+2.2
3,551,892	+				+0.6
3,552,247	+		PS417_16205	0.62	-0.4
3,552,324	+		PS417_16205	0.80	-0.3
3,552,324	+		PS417_16205	0.80	-0.2
3,552,324	+		PS417_16205	0.80	-0.3
3,552,444	+				-0.2
3,552,448	-				+0.1
3,552,455	+				+0.6
3,552,534	+				-0.7
3,552,585	-		PS417_16210	0.12	+1.1
3,552,675	-		PS417_16210	0.21	-0.1
3,552,683	+		PS417_16210	0.22	-1.7
3,552,697	-				+0.8
3,552,723	-		PS417_16210	0.26	-0.6
3,552,727	+		PS417_16210	0.26	-1.0