Strain Fitness in Pseudomonas simiae WCS417 around PS417_16180

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
3,546,152	-				+0.1
3,546,152	-				-0.2
3,546,349	+		PS417_16175	0.28	+1.2
3,546,350	-		PS417_16175	0.29	-0.1
3,546,350	-		PS417_16175	0.29	+0.2
3,546,535	-		PS417_16175	0.53	+0.2
3,546,591	+		PS417_16175	0.60	-1.0
3,546,592	-		PS417_16175	0.61	-0.7
3,546,593	+				+0.1
3,546,640	-		PS417_16175	0.67	-0.4
3,546,663	-		PS417_16175	0.70	-0.2
3,546,977	-				-0.0
3,547,402	-		PS417_16180	0.24	-0.1
3,547,609	-		PS417_16180	0.42	-0.4
3,547,609	-		PS417_16180	0.42	+0.1
3,547,656	+		PS417_16180	0.46	-0.7
3,548,036	-		PS417_16180	0.78	-0.3
3,548,130	+		PS417_16180	0.86	-0.1
3,548,131	-		PS417_16180	0.86	-0.5
3,548,367	-				+0.9
3,548,367	-				-0.4
3,548,368	+				-0.7
3,548,449	-				+1.1
3,548,449	-				-1.2
3,548,490	-		PS417_16185	0.19	+0.3
3,548,494	-		PS417_16185	0.20	+0.7
3,548,506	-		PS417_16185	0.23	-0.4
3,548,509	-		PS417_16185	0.24	-0.4
3,548,834	+				-0.7
3,548,865	+				+0.4
3,549,236	+		PS417_16190	0.37	+0.1