Strain Fitness in Pseudomonas simiae WCS417 around PS417_14985
Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X |
|---|---|---|---|---|---|
| remove | |||||
| 3,274,879 | + | PS417_14980 | 0.41 | -0.2 | |
| 3,275,539 | + | -0.3 | |||
| 3,275,565 | + | -0.0 | |||
| 3,275,567 | + | -0.9 | |||
| 3,275,672 | + | PS417_14985 | 0.31 | +5.1 | |
| 3,275,720 | + | PS417_14985 | 0.41 | -1.0 | |
| 3,275,720 | + | PS417_14985 | 0.41 | +0.2 | |
| 3,275,733 | - | PS417_14985 | 0.44 | -1.4 | |
| 3,275,883 | - | PS417_14985 | 0.76 | -0.8 | |
| 3,276,085 | + | +0.2 | |||
| 3,276,086 | - | -0.4 | |||
| 3,276,125 | + | +0.4 |
Or see this region's nucleotide sequence