Strain Fitness in Pseudomonas simiae WCS417 around PS417_01330
Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X |
---|---|---|---|---|---|
remove | |||||
287,790 | + | +1.2 | |||
288,868 | + | -0.6 | |||
288,868 | + | -0.7 | |||
288,869 | - | +0.5 | |||
288,945 | + | -0.5 | |||
288,946 | - | +0.5 | |||
288,946 | - | +0.6 | |||
288,946 | - | +0.2 | |||
289,009 | + | +0.4 | |||
289,063 | - | -1.1 | |||
289,114 | - | +0.7 | |||
289,114 | - | +1.0 | |||
289,114 | - | +1.4 | |||
289,209 | - | +0.1 | |||
289,314 | + | PS417_01335 | 0.12 | -0.9 | |
289,315 | - | PS417_01335 | 0.12 | -0.4 | |
289,315 | - | PS417_01335 | 0.12 | -1.0 |
Or see this region's nucleotide sequence