Strain Fitness in Pseudomonas simiae WCS417 around PS417_12395

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,694,195	-		PS417_12390	0.24	-0.5
2,694,264	-		PS417_12390	0.32	+0.7
2,694,678	-		PS417_12390	0.82	-0.1
2,694,784	+				+0.8
2,694,790	+				-0.2
2,694,795	-				+0.8
2,694,824	+				-0.1
2,694,824	+				+1.0
2,694,824	+				+1.7
2,694,824	+				-0.4
2,694,868	-				+0.8
2,695,185	+		PS417_12395	0.13	+0.5
2,695,185	+		PS417_12395	0.13	+1.1
2,695,245	+		PS417_12395	0.15	+0.3
2,695,245	+		PS417_12395	0.15	+1.2
2,695,246	-		PS417_12395	0.15	+1.7
2,695,246	-		PS417_12395	0.15	+0.5
2,695,246	-		PS417_12395	0.15	+0.5
2,695,248	+		PS417_12395	0.15	+1.2
2,695,455	-				+1.9
2,695,455	-		PS417_12395	0.23	+1.3
2,695,483	+		PS417_12395	0.24	+0.9
2,695,497	+		PS417_12395	0.25	+1.1
2,695,497	+		PS417_12395	0.25	+0.1
2,695,578	+		PS417_12395	0.28	+1.5
2,695,578	+		PS417_12395	0.28	+0.6
2,695,579	-		PS417_12395	0.28	+0.3
2,695,752	+		PS417_12395	0.34	+1.5
2,695,753	-		PS417_12395	0.34	+0.0
2,695,897	-				-0.6
2,695,983	+		PS417_12395	0.43	+0.5
2,695,984	-		PS417_12395	0.43	+1.6
2,695,984	-		PS417_12395	0.43	+0.1
2,695,998	+		PS417_12395	0.44	-0.1
2,696,175	+		PS417_12395	0.50	+0.3
2,696,217	+		PS417_12395	0.52	+1.7
2,696,218	-		PS417_12395	0.52	+1.4
2,696,345	+		PS417_12395	0.57	+0.9
2,697,391	-				+2.3
2,697,495	+				-0.1
2,697,495	+				+0.5
2,697,635	-				-0.3
2,698,040	+		PS417_12400	0.47	-0.1
2,698,108	-		PS417_12400	0.53	-1.3
2,698,346	+		PS417_12400	0.76	-0.2
2,698,347	-		PS417_12400	0.76	+0.2
2,698,347	-		PS417_12400	0.76	-0.4
2,698,347	-		PS417_12400	0.76	-0.3
2,698,425	-		PS417_12400	0.84	-0.9