Strain Fitness in Pseudomonas simiae WCS417 around PS417_12350

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,683,550	+		PS417_12345	0.28	-0.5
2,683,550	+		PS417_12345	0.28	-0.3
2,683,594	+		PS417_12345	0.32	-0.8
2,684,529	+				-2.6
2,684,592	+				-0.6
2,684,695	+				-0.0
2,684,696	-		PS417_12350	0.10	+0.7
2,684,696	-		PS417_12350	0.10	-0.6
2,684,696	-		PS417_12350	0.10	-1.1
2,684,696	-		PS417_12350	0.10	-0.4
2,684,696	-		PS417_12350	0.10	+0.4
2,684,700	-		PS417_12350	0.10	-0.2
2,684,776	-		PS417_12350	0.12	-0.2
2,684,796	+		PS417_12350	0.13	-1.7
2,684,937	+		PS417_12350	0.16	-1.5
2,685,632	+				-0.0
2,685,693	+		PS417_12350	0.37	-0.0
2,685,921	+		PS417_12350	0.43	-0.2
2,685,921	+		PS417_12350	0.43	-0.2
2,685,922	-		PS417_12350	0.43	+0.3
2,685,942	+		PS417_12350	0.43	-1.3
2,686,062	-		PS417_12350	0.46	-1.2
2,686,066	-		PS417_12350	0.46	-0.2
2,686,073	+		PS417_12350	0.47	-0.8
2,686,074	-		PS417_12350	0.47	+0.4
2,686,170	+		PS417_12350	0.49	-0.4
2,686,212	+		PS417_12350	0.50	+0.2
2,686,212	+		PS417_12350	0.50	-0.2
2,686,213	-		PS417_12350	0.50	-0.4
2,686,213	-		PS417_12350	0.50	-0.8
2,686,213	-		PS417_12350	0.50	-1.3
2,686,357	-		PS417_12350	0.54	-1.3
2,686,357	-		PS417_12350	0.54	-0.2
2,686,357	-		PS417_12350	0.54	-0.5
2,686,357	-				-0.2
2,686,357	-		PS417_12350	0.54	-0.1
2,686,653	+		PS417_12350	0.62	+1.0
2,686,653	+		PS417_12350	0.62	-0.3
2,686,906	+		PS417_12350	0.69	-0.7
2,686,928	+		PS417_12350	0.69	-1.6
2,687,141	-		PS417_12350	0.75	+0.7
2,687,404	-		PS417_12350	0.82	-0.6
2,687,490	+		PS417_12350	0.84	-0.9
2,687,616	+		PS417_12350	0.88	-0.9
2,687,616	+		PS417_12350	0.88	-1.0
2,687,616	+		PS417_12350	0.88	-0.3
2,687,617	-		PS417_12350	0.88	-0.2
2,687,617	-		PS417_12350	0.88	-0.5
2,687,617	-		PS417_12350	0.88	-0.7
2,687,805	+				+0.0
2,687,806	-				-0.7
2,688,064	+				-0.5
2,688,065	-				-0.4
2,688,065	-				+1.0
2,688,065	-				+0.2
2,688,065	-				+0.9
2,688,078	+				-0.6
2,688,442	+		PS417_12355	0.31	+2.0
2,688,443	-		PS417_12355	0.31	-0.4
2,688,939	+		PS417_12355	0.80	+0.3
2,688,940	-		PS417_12355	0.80	+1.0