Strain Fitness in Pseudomonas simiae WCS417 around PS417_09560

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,067,486	+				-0.3
2,067,486	+				-0.3
2,067,486	+				+0.7
2,067,487	-				-0.6
2,067,487	-				-0.2
2,067,487	-				+0.4
2,067,488	+				-0.0
2,067,488	+				-0.4
2,067,522	+				+1.1
2,067,522	+				-0.0
2,067,522	+				-0.1
2,067,523	-				+0.5
2,067,579	+				-0.7
2,067,579	+				-0.2
2,067,579	+				-0.2
2,067,579	+				+0.2
2,067,579	+				+0.2
2,067,579	+				+0.1
2,067,579	+				-0.9
2,067,579	+				+0.4
2,067,580	-				-0.5
2,067,580	-				-0.5
2,067,580	-				+0.2
2,067,580	-				+0.2
2,067,587	+				-0.4
2,067,587	+				+0.4
2,067,591	-				-0.3
2,067,591	-				-0.6
2,067,912	-		PS417_09550	0.71	-0.0
2,068,021	+				-0.9
2,068,087	+				-0.6
2,068,135	-				-0.4
2,068,164	+				+0.5
2,068,164	+				+0.3
2,068,165	-				-0.5
2,068,365	+				+0.6
2,068,434	+				+0.6
2,068,446	-				+0.1
2,068,498	-				-0.2
2,068,763	-		PS417_09560	0.21	-0.4
2,068,763	-		PS417_09560	0.21	-0.1
2,068,778	+		PS417_09560	0.22	-0.7
2,068,778	+		PS417_09560	0.22	+0.5
2,068,778	+		PS417_09560	0.22	-0.4
2,068,782	+		PS417_09560	0.22	+0.5
2,068,782	+		PS417_09560	0.22	+0.2
2,068,830	+		PS417_09560	0.24	-0.8
2,068,830	+		PS417_09560	0.24	-0.1
2,068,830	+		PS417_09560	0.24	+0.3
2,068,830	+		PS417_09560	0.24	-0.9
2,068,831	-		PS417_09560	0.24	-0.4
2,068,907	-		PS417_09560	0.28	+0.3
2,068,975	-		PS417_09560	0.31	+0.6
2,069,041	-		PS417_09560	0.34	+0.3
2,069,041	-		PS417_09560	0.34	+0.2
2,069,068	-		PS417_09560	0.35	-0.4
2,069,073	+				+2.4
2,069,074	-		PS417_09560	0.35	-0.4
2,069,265	+		PS417_09560	0.44	+4.1
2,069,265	+		PS417_09560	0.44	+0.2
2,069,265	+		PS417_09560	0.44	+0.5
2,069,265	+		PS417_09560	0.44	+0.4
2,069,301	+		PS417_09560	0.45	-0.3
2,069,301	+		PS417_09560	0.45	-0.4
2,069,301	+		PS417_09560	0.45	+0.3
2,069,302	-		PS417_09560	0.45	+0.3
2,069,302	-		PS417_09560	0.45	+0.1
2,069,611	-		PS417_09560	0.59	+0.9
2,069,861	+		PS417_09560	0.70	+0.1
2,070,237	+				+1.3
2,070,238	-		PS417_09560	0.87	+0.7
2,070,324	+				+1.0
2,070,547	+				-0.5
2,070,548	-				-0.4
2,070,548	-				+1.5
2,070,726	+				-0.8
2,070,821	-				-0.2
2,070,965	+		PS417_09565	0.10	-0.1
2,070,967	+		PS417_09565	0.11	-0.2
2,071,031	+				-0.9
2,071,062	-		PS417_09565	0.15	-0.4
2,071,174	+		PS417_09565	0.19	+0.0
2,071,175	-		PS417_09565	0.19	+0.5
2,071,220	+		PS417_09565	0.21	-0.7
2,071,221	-		PS417_09565	0.21	-0.4
2,071,259	+		PS417_09565	0.23	-0.3
2,071,259	+		PS417_09565	0.23	+0.2
2,071,260	-		PS417_09565	0.23	+0.6
2,071,260	-		PS417_09565	0.23	+0.3
2,071,511	+		PS417_09565	0.34	+0.5