Strain Fitness in Pseudomonas simiae WCS417 around PS417_09225

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,002,605	-		PS417_09215	0.57	-0.5
2,002,940	+		PS417_09215	0.85	-0.9
2,002,940	+		PS417_09215	0.85	+0.6
2,002,941	-		PS417_09215	0.85	-0.4
2,002,941	-				-0.7
2,003,128	-				-0.5
2,003,128	-				-0.7
2,003,131	-				-0.3
2,003,394	+		PS417_09220	0.73	-0.1
2,003,394	+		PS417_09220	0.73	-0.7
2,003,546	-				-1.3
2,003,808	+		PS417_09225	0.19	-1.2
2,004,187	-		PS417_09225	0.52	-2.0
2,004,234	-		PS417_09225	0.56	-1.4
2,004,260	+		PS417_09225	0.59	-1.0
2,004,333	-		PS417_09225	0.65	-0.5
2,004,333	-		PS417_09225	0.65	-1.3
2,004,333	-		PS417_09225	0.65	-1.6
2,004,553	-		PS417_09225	0.84	-1.5
2,004,681	+				-2.0
2,004,682	-				-1.6
2,004,684	-				-2.1
2,004,732	+				+0.7
2,004,733	-				-0.2
2,004,742	+				+1.3
2,004,742	+				-0.3
2,004,743	-				+0.7
2,004,925	+				-1.4
2,004,925	+				-0.3
2,004,926	-				-0.5
2,004,955	-				-0.3
2,005,189	+		PS417_09230	0.21	+0.0
2,005,189	+				-0.7
2,005,576	+				-1.4
2,005,576	+		PS417_09230	0.41	+0.5
2,005,673	+		PS417_09230	0.46	+0.2
2,005,673	+		PS417_09230	0.46	-0.3