Strain Fitness in Pseudomonas simiae WCS417 around PS417_09215

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,000,957	-		PS417_09205	0.74	+0.2
2,000,957	-		PS417_09205	0.74	+0.1
2,001,112	+				+0.2
2,001,112	+				+1.9
2,001,112	+				+0.5
2,001,113	-				+0.7
2,001,113	-				-0.5
2,001,131	+				-0.3
2,001,235	+				+1.0
2,001,236	-				+0.0
2,001,328	-				+1.5
2,001,328	-				+0.9
2,001,365	-		PS417_09210	0.12	-1.9
2,001,369	+		PS417_09210	0.13	-0.5
2,001,681	-		PS417_09210	0.71	-2.4
2,001,802	-				-0.6
2,001,829	+				-1.1
2,001,928	+				-0.7
2,002,022	+				-1.5
2,002,022	+				-0.7
2,002,023	-				-0.1
2,002,086	-		PS417_09215	0.13	+1.1
2,002,086	-		PS417_09215	0.13	-0.0
2,002,201	+		PS417_09215	0.23	-0.3
2,002,201	+		PS417_09215	0.23	-1.3
2,002,419	-		PS417_09215	0.41	+0.6
2,002,462	-		PS417_09215	0.45	+0.3
2,002,462	-		PS417_09215	0.45	-1.0
2,002,530	+		PS417_09215	0.50	+0.5
2,002,605	-		PS417_09215	0.57	-0.5
2,002,940	+		PS417_09215	0.85	-0.9
2,002,940	+		PS417_09215	0.85	+0.6
2,002,941	-		PS417_09215	0.85	-0.4
2,002,941	-				-0.7
2,003,128	-				-0.5
2,003,128	-				-0.7
2,003,131	-				-0.3
2,003,394	+		PS417_09220	0.73	-0.1
2,003,394	+		PS417_09220	0.73	-0.7
2,003,546	-				-1.3
2,003,808	+		PS417_09225	0.19	-1.2