Strain Fitness in Pseudomonas simiae WCS417 around PS417_08465

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,851,841	+				+0.9
1,851,946	-				+0.3
1,851,946	-		PS417_08460	0.71	-1.3
1,852,221	+				-0.6
1,852,245	+				+0.2
1,852,246	-				+1.2
1,852,253	-				-1.2
1,852,339	+				+0.9
1,852,351	-				+0.6
1,852,360	-				-1.5
1,852,365	+				-0.1
1,852,366	-				-1.6
1,852,592	+		PS417_08465	0.51	+0.2
1,852,593	-		PS417_08465	0.51	-0.0
1,852,593	-		PS417_08465	0.51	-0.6
1,852,701	-		PS417_08465	0.74	-0.8
1,852,701	-		PS417_08465	0.74	+0.5
1,852,701	-		PS417_08465	0.74	-0.2
1,852,821	+				+0.1
1,852,822	-				-0.3
1,852,822	-				+0.0
1,852,929	-		PS417_08470	0.26	-0.4
1,852,993	+		PS417_08470	0.43	-0.1
1,853,095	+		PS417_08470	0.71	+0.1
1,853,096	-		PS417_08470	0.71	-0.7
1,853,296	+				+0.9
1,853,296	+				+0.1