Strain Fitness in Pseudomonas simiae WCS417 around PS417_05535

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,244,105	-		PS417_05525	0.64	-1.2
1,244,303	+		PS417_05525	0.79	-0.3
1,244,304	-		PS417_05525	0.79	-1.6
1,244,470	+				-1.2
1,244,470	+				-0.3
1,244,471	-				-0.9
1,244,475	-				-1.0
1,244,475	-				-0.5
1,244,745	+				-0.5
1,244,746	-		PS417_05530	0.32	+0.1
1,244,746	-		PS417_05530	0.32	+0.9
1,244,760	+		PS417_05530	0.37	-0.3
1,244,844	+		PS417_05530	0.61	+0.1
1,244,845	-		PS417_05530	0.62	-0.1
1,244,895	+		PS417_05530	0.76	-0.2
1,244,896	-		PS417_05530	0.77	-1.0
1,244,896	-		PS417_05530	0.77	-1.7
1,244,898	+		PS417_05530	0.77	+0.4
1,245,003	+				-1.1
1,245,393	-				+1.0
1,245,393	-		PS417_05535	0.31	-0.4
1,245,393	-		PS417_05535	0.31	+0.8
1,245,529	+		PS417_05535	0.41	-1.4
1,246,255	+				-0.0
1,246,255	+				-0.4
1,246,255	+				-0.3
1,246,256	-				-0.4
1,246,256	-				-0.2
1,246,563	-		PS417_05540	0.13	+1.3
1,246,563	-		PS417_05540	0.13	+0.6
1,246,563	-		PS417_05540	0.13	+0.4
1,246,617	-		PS417_05540	0.16	+0.5