Strain Fitness in Pseudomonas simiae WCS417 around PS417_05480

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,233,553	+				-1.7
1,233,767	+		PS417_05475	0.24	-2.5
1,234,195	-		PS417_05475	0.70	-0.8
1,234,308	+		PS417_05475	0.83	-0.5
1,234,308	+		PS417_05475	0.83	+0.5
1,234,309	-		PS417_05475	0.83	-1.2
1,234,309	-		PS417_05475	0.83	-1.8
1,235,285	+				-0.6
1,235,285	+				-1.3
1,235,285	+				-0.3
1,235,511	+		PS417_05490	0.21	-2.1
1,235,512	-		PS417_05490	0.21	-0.5
1,235,512	-		PS417_05490	0.21	-0.8
1,235,524	-		PS417_05490	0.23	-0.9
1,235,577	+		PS417_05490	0.29	-0.6
1,235,577	+				+0.5
1,235,578	-		PS417_05490	0.29	-0.4
1,235,578	-		PS417_05490	0.29	+0.4
1,235,580	+		PS417_05490	0.29	-1.7
1,235,653	-		PS417_05490	0.37	-0.3
1,235,670	+		PS417_05490	0.39	+1.0
1,235,670	+		PS417_05490	0.39	-0.7
1,235,671	-		PS417_05490	0.39	+1.0
1,235,671	-		PS417_05490	0.39	-1.1
1,235,671	-		PS417_05490	0.39	-0.3
1,235,745	+		PS417_05490	0.48	-0.6
1,235,787	+		PS417_05490	0.53	+0.3
1,235,788	-		PS417_05490	0.53	-0.8
1,235,788	-		PS417_05490	0.53	+1.0