Strain Fitness in Pseudomonas simiae WCS417 around PS417_05070

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,125,212	+		PS417_05060	0.41	-0.6
1,125,212	+		PS417_05060	0.41	-0.0
1,125,212	+		PS417_05060	0.41	+0.3
1,125,242	+		PS417_05060	0.47	-0.3
1,125,242	+		PS417_05060	0.47	-0.3
1,125,242	+		PS417_05060	0.47	+0.6
1,125,260	-		PS417_05060	0.51	-0.3
1,125,281	+		PS417_05060	0.55	+0.7
1,125,281	+		PS417_05060	0.55	-0.6
1,125,282	-		PS417_05060	0.55	+0.0
1,125,282	-		PS417_05060	0.55	-0.2
1,125,359	+		PS417_05060	0.71	+0.1
1,125,359	+		PS417_05060	0.71	-0.3
1,125,360	-		PS417_05060	0.71	-0.6
1,125,541	+		PS417_05065	0.14	-0.2
1,125,541	+		PS417_05065	0.14	-0.1
1,125,824	+				+0.5
1,125,827	+				-0.4
1,125,827	+				+1.0
1,125,827	+				-1.3
1,125,906	+				-0.5
1,125,907	-				+0.5
1,125,932	+				-1.1
1,125,934	+				-0.1
1,125,935	-				+0.6
1,126,006	-				-0.2
1,126,013	-				+2.3
1,126,013	-				-0.1
1,126,013	-				-1.2
1,126,019	+				+0.8
1,126,019	+				+0.3
1,126,061	+				+1.1
1,126,061	+				-0.1
1,126,148	+				+0.2
1,126,148	+				+0.2
1,126,148	+				+0.2
1,126,149	-				-0.4
1,126,149	-				-0.1
1,126,149	-				-0.3
1,126,149	-				-0.2
1,126,203	+				+0.1
1,126,203	+				+0.2
1,126,203	+				+0.3
1,126,412	+		PS417_05070	0.25	-0.1
1,126,413	-		PS417_05070	0.25	-0.8
1,126,416	+		PS417_05070	0.25	+3.0
1,126,416	+		PS417_05070	0.25	-0.3
1,126,416	+		PS417_05070	0.25	+0.3
1,126,416	+		PS417_05070	0.25	+0.2
1,126,416	+		PS417_05070	0.25	+0.6
1,126,417	-		PS417_05070	0.26	-0.6
1,126,435	+				-0.3
1,126,436	-		PS417_05070	0.27	+0.8
1,126,436	-		PS417_05070	0.27	-0.6
1,126,470	+		PS417_05070	0.30	-0.1
1,126,506	+		PS417_05070	0.32	+0.0
1,126,506	+		PS417_05070	0.32	-0.0
1,126,507	-		PS417_05070	0.33	+0.4
1,126,722	-		PS417_05070	0.49	-0.2
1,127,022	+		PS417_05070	0.73	+0.2
1,127,023	-		PS417_05070	0.73	+1.0
1,127,301	+				-0.9
1,127,301	+				+1.4
1,127,302	-				+1.8
1,127,302	-				-0.2
1,127,359	+				-0.2
1,127,359	+				+0.5
1,127,359	+				-0.3
1,127,359	+				-1.5
1,127,359	+				-0.5
1,127,360	-				-0.7
1,127,360	-				+0.8
1,127,360	-				-0.3
1,127,363	+				-0.4
1,127,363	+				-0.2
1,127,363	+				-0.4
1,127,363	+				+1.1
1,127,364	-				-0.7
1,127,364	-				-0.2
1,127,364	-				+0.0
1,127,390	-				-0.5
1,127,393	-				-0.7
1,127,486	-				-0.2
1,127,902	+		PS417_05075	0.34	-0.5
1,127,902	+		PS417_05075	0.34	-0.2
1,127,902	+		PS417_05075	0.34	-0.4
1,127,902	+		PS417_05075	0.34	-0.5
1,127,903	-		PS417_05075	0.34	-0.8
1,127,903	-		PS417_05075	0.34	-0.7
1,127,903	-		PS417_05075	0.34	-0.5
1,127,903	-		PS417_05075	0.34	-0.4
1,127,903	-		PS417_05075	0.34	+0.1
1,127,903	-		PS417_05075	0.34	+1.0
1,127,905	+		PS417_05075	0.34	-0.0
1,127,905	+		PS417_05075	0.34	-0.1
1,127,906	-		PS417_05075	0.34	-0.6
1,127,906	-		PS417_05075	0.34	-1.0
1,127,906	-		PS417_05075	0.34	+0.5
1,128,173	+		PS417_05075	0.54	+0.8
1,128,173	+		PS417_05075	0.54	-0.4
1,128,174	-		PS417_05075	0.54	+0.4
1,128,174	-		PS417_05075	0.54	-1.8
1,128,174	-		PS417_05075	0.54	-0.6