Strain Fitness in Pseudomonas simiae WCS417 around PS417_05050

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,122,734	+		PS417_05045	0.47	+0.1
1,122,983	+		PS417_05045	0.66	+0.4
1,122,984	-		PS417_05045	0.66	-0.2
1,123,318	-				-0.4
1,123,383	-				+0.2
1,123,443	+				-0.0
1,123,471	-				+0.7
1,123,471	-				-0.9
1,123,471	-				-0.3
1,123,471	-				+0.1
1,123,501	+				+1.0
1,123,525	+				-1.0
1,123,547	-				-0.5
1,123,547	-				+0.1
1,123,556	+				-0.5
1,123,556	+				+0.6
1,123,556	+				-0.5
1,123,557	-				-0.0
1,123,557	-				-0.4
1,123,557	-				+0.9
1,123,560	+				+0.3
1,123,560	+				-0.3
1,123,561	-				+0.8
1,123,561	-				+0.3
1,123,583	+				-1.7
1,123,583	+				+1.5
1,123,584	-				-0.3
1,123,601	+				-0.6
1,123,601	+				-0.0
1,123,668	+				-0.9
1,123,668	+				-0.8
1,123,669	-				-0.7
1,123,740	-				+0.5
1,123,980	-		PS417_05050	0.43	+0.1
1,124,090	+		PS417_05050	0.58	-1.5
1,124,240	+		PS417_05050	0.79	-0.2
1,124,241	-		PS417_05050	0.80	-0.4
1,124,241	-		PS417_05050	0.80	-0.0
1,124,312	+		PS417_05050	0.89	+0.4
1,124,385	-				-0.6
1,124,395	+				-0.9
1,124,396	-				+0.2
1,124,406	-				+0.6
1,124,478	-				-0.2
1,124,478	-				-0.7
1,124,568	+		PS417_05055	0.35	-0.3
1,124,568	+		PS417_05055	0.35	+0.6
1,124,691	+		PS417_05055	0.82	-0.3
1,124,691	+		PS417_05055	0.82	+1.6
1,124,692	-		PS417_05055	0.83	+0.2
1,124,763	+				+0.8
1,124,763	+				+0.5
1,124,764	-				-0.2
1,124,814	-				-0.8
1,124,870	+				-1.3
1,124,870	+				+0.7
1,124,920	+				-1.1
1,124,922	+				-0.8
1,124,923	-				+0.3
1,124,923	-				-0.4
1,124,996	+				-0.5
1,125,049	-				+0.1
1,125,049	-				+0.7
1,125,212	+		PS417_05060	0.41	+0.9
1,125,212	+		PS417_05060	0.41	-0.3
1,125,212	+		PS417_05060	0.41	+1.1
1,125,242	+		PS417_05060	0.47	+0.4
1,125,242	+		PS417_05060	0.47	+0.5
1,125,242	+		PS417_05060	0.47	+0.0
1,125,260	-		PS417_05060	0.51	+0.3
1,125,281	+		PS417_05060	0.55	-0.8
1,125,281	+		PS417_05060	0.55	-0.5
1,125,282	-		PS417_05060	0.55	-0.4
1,125,282	-		PS417_05060	0.55	-1.6
1,125,359	+		PS417_05060	0.71	-0.0
1,125,359	+		PS417_05060	0.71	-0.3
1,125,360	-		PS417_05060	0.71	+0.2