Strain Fitness in Pseudomonas simiae WCS417 around PS417_05040

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,120,492	+		PS417_05035	0.49	-0.5
1,120,492	+		PS417_05035	0.49	-0.3
1,120,493	-		PS417_05035	0.49	+0.2
1,120,804	+		PS417_05035	0.88	+0.4
1,120,805	-		PS417_05035	0.88	+1.2
1,120,805	-		PS417_05035	0.88	+4.0
1,120,805	-		PS417_05035	0.88	+1.1
1,120,981	+				+3.4
1,120,981	+				+0.2
1,120,981	+				-0.2
1,120,982	-				-0.4
1,121,012	+				-0.3
1,121,013	-				+0.4
1,121,049	+				+0.3
1,121,050	-				-0.2
1,121,050	-				+0.3
1,121,051	+				-0.5
1,121,051	+				+0.5
1,121,052	-				+0.6
1,121,052	-				+0.2
1,121,052	-				-0.3
1,121,282	+		PS417_05040	0.19	+1.1
1,121,282	+		PS417_05040	0.19	+0.4
1,121,282	+		PS417_05040	0.19	+0.1
1,121,282	+		PS417_05040	0.19	+0.3
1,121,411	+				+2.9
1,121,412	-		PS417_05040	0.32	-0.6
1,121,949	-		PS417_05040	0.84	-0.4
1,122,110	+				+0.0
1,122,110	+				+3.7
1,122,111	-				+0.1
1,122,111	-				-0.1
1,122,128	+				-1.0
1,122,348	+		PS417_05045	0.18	-2.2
1,122,368	-		PS417_05045	0.19	-0.9
1,122,533	-		PS417_05045	0.32	-0.1
1,122,593	+		PS417_05045	0.36	-0.5
1,122,594	-		PS417_05045	0.36	-0.3
1,122,734	+		PS417_05045	0.47	+0.1
1,122,983	+		PS417_05045	0.66	+0.4
1,122,984	-		PS417_05045	0.66	-0.2