Strain Fitness in Pseudomonas simiae WCS417 around PS417_04745

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,051,772	+		PS417_04740	0.37	-0.3
1,051,773	-		PS417_04740	0.37	-0.9
1,051,773	-		PS417_04740	0.37	+0.4
1,052,204	+		PS417_04740	0.66	+0.1
1,052,204	+		PS417_04740	0.66	-0.7
1,052,204	+		PS417_04740	0.66	+1.3
1,052,258	+		PS417_04740	0.69	+1.1
1,052,258	+		PS417_04740	0.69	-0.2
1,052,258	+		PS417_04740	0.69	-0.8
1,052,259	-		PS417_04740	0.70	-2.0
1,052,340	-		PS417_04740	0.75	-0.1
1,052,360	+		PS417_04740	0.76	-0.6
1,052,721	+				+0.2
1,052,722	-				+0.1
1,052,826	+				-0.2
1,052,826	+				-0.2
1,052,827	-				-0.3
1,052,827	-				+0.1
1,052,827	-				+0.5
1,052,827	-				-1.9
1,052,828	+				-0.9
1,052,828	+				-1.3
1,052,829	-				-1.7
1,052,829	-				-1.3
1,053,141	-		PS417_04745	0.19	+1.2
1,053,684	+		PS417_04745	0.44	-0.2
1,053,684	+		PS417_04745	0.44	+1.0
1,053,684	+		PS417_04745	0.44	-1.0
1,053,819	+		PS417_04745	0.50	-1.0
1,053,819	+		PS417_04745	0.50	-0.6
1,053,961	-		PS417_04745	0.56	-0.5
1,054,290	+		PS417_04745	0.71	-1.6
1,054,290	+				+1.2
1,054,291	-		PS417_04745	0.71	-0.2
1,054,299	-		PS417_04745	0.72	-0.1
1,054,309	-		PS417_04745	0.72	-0.4
1,054,309	-		PS417_04745	0.72	-0.6
1,054,937	-		PS417_04750	0.15	-0.3
1,054,937	-		PS417_04750	0.15	+0.2
1,054,937	-		PS417_04750	0.15	+1.4
1,054,937	-		PS417_04750	0.15	+0.0
1,054,937	-		PS417_04750	0.15	-0.5
1,054,938	+		PS417_04750	0.16	+0.6
1,054,938	+		PS417_04750	0.16	+0.6
1,054,938	+		PS417_04750	0.16	+0.8
1,054,939	-		PS417_04750	0.16	+1.3
1,054,939	-		PS417_04750	0.16	-0.4
1,055,173	+				-0.6
1,055,198	+				+1.6
1,055,198	+				-0.5
1,055,198	+				-1.2
1,055,199	-				-1.0
1,055,517	-		PS417_04755	0.46	+0.1
1,055,594	+		PS417_04755	0.55	-0.8
1,055,594	+		PS417_04755	0.55	-0.9
1,055,595	-		PS417_04755	0.56	-0.7
1,055,595	-		PS417_04755	0.56	-1.4
1,055,595	-		PS417_04755	0.56	+1.0
1,055,628	-		PS417_04755	0.59	-1.1
1,055,801	+		PS417_04755	0.79	-0.2
1,055,802	-		PS417_04755	0.80	-2.1
1,055,802	-		PS417_04755	0.80	-1.1
1,055,802	-		PS417_04755	0.80	-0.4