Strain Fitness in Pseudomonas simiae WCS417 around PS417_25955

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
5,605,274	+		PS417_25950	0.40	-0.4
5,605,382	+		PS417_25950	0.49	-0.4
5,605,691	+		PS417_25950	0.73	+2.0
5,606,031	+				+0.3
5,606,032	-				+0.4
5,606,032	-				-0.5
5,606,045	+				-0.6
5,606,111	-				+0.8
5,606,156	+				-1.7
5,606,157	-				+1.7
5,606,169	+				-1.0
5,606,277	+				+0.4
5,606,294	-				+0.9
5,606,433	+		PS417_25955	0.21	+2.6
5,606,434	-		PS417_25955	0.21	+1.0
5,606,434	-		PS417_25955	0.21	-0.4
5,606,680	-		PS417_25955	0.49	+1.0
5,606,680	-		PS417_25955	0.49	+4.2
5,606,721	+		PS417_25955	0.53	+0.2
5,606,722	-		PS417_25955	0.53	-0.3
5,606,722	-		PS417_25955	0.53	+0.8
5,606,722	-		PS417_25955	0.53	-0.2
5,606,735	-		PS417_25955	0.55	-1.7
5,606,890	+		PS417_25955	0.72	-0.2
5,606,890	+		PS417_25955	0.72	+1.4
5,607,233	+				+0.2
5,607,233	+				-1.7
5,607,234	-				-0.6
5,607,283	+				-0.9
5,607,283	+				-0.6
5,607,284	-				+0.2
5,607,284	-				-0.0
5,607,337	+				-0.3
5,607,338	-				+0.4
5,607,338	-				-0.4
5,607,349	+				-0.3
5,607,350	-				+0.8
5,607,368	+				+0.1
5,607,368	+				+0.8
5,607,491	+				+0.2
5,607,491	+				-0.3
5,607,492	-				-1.6
5,607,548	+		PS417_25960	0.10	+0.6
5,607,548	+		PS417_25960	0.10	-0.1
5,607,549	-		PS417_25960	0.10	+0.1
5,607,549	-		PS417_25960	0.10	+0.3
5,607,554	+		PS417_25960	0.11	-0.5
5,607,555	-		PS417_25960	0.11	-1.6
5,607,555	-		PS417_25960	0.11	+1.1
5,607,563	+		PS417_25960	0.11	-0.3
5,607,563	+		PS417_25960	0.11	-1.0
5,607,563	+		PS417_25960	0.11	-0.3
5,607,581	+		PS417_25960	0.12	+0.4
5,607,750	+		PS417_25960	0.22	+1.6
5,607,751	-		PS417_25960	0.22	+0.3
5,607,751	-		PS417_25960	0.22	-1.5
5,607,751	-		PS417_25960	0.22	+0.3
5,607,752	+		PS417_25960	0.22	-0.6
5,607,752	+		PS417_25960	0.22	+0.2
5,607,752	+		PS417_25960	0.22	+1.1
5,607,752	+		PS417_25960	0.22	-1.1
5,607,753	-		PS417_25960	0.22	+0.6
5,607,753	-		PS417_25960	0.22	-0.3
5,607,753	-		PS417_25960	0.22	-0.3
5,607,753	-		PS417_25960	0.22	-0.1
5,607,824	+		PS417_25960	0.26	+0.0
5,607,824	+		PS417_25960	0.26	-0.1
5,607,824	+		PS417_25960	0.26	-0.1
5,607,825	-		PS417_25960	0.26	-2.1