Strain Fitness in Pseudomonas simiae WCS417 around PS417_24985

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
5,417,905	-				+1.4
5,417,933	-				-0.5
5,418,011	+				+0.0
5,418,011	+				+0.3
5,418,012	-				-0.8
5,418,215	+				+0.5
5,418,220	+				-0.0
5,418,220	+				+0.4
5,418,220	+				-0.3
5,418,220	+				-0.6
5,418,221	-				-0.4
5,418,260	+				-0.1
5,418,260	+				+0.1
5,418,261	-				-0.1
5,418,261	-				-0.4
5,418,261	-				+0.0
5,418,269	+				+2.0
5,418,270	-				+0.8
5,418,324	+				-0.5
5,418,325	-				-0.3
5,418,520	+				+2.2
5,418,521	-				+0.8
5,418,521	-				+0.1
5,418,521	-				-0.1
5,418,528	+				+0.4
5,418,529	-				-1.0
5,418,562	+				-0.8
5,418,722	+				-0.4
5,418,723	-				-0.0
5,418,737	-				-0.5
5,418,868	+				-0.3
5,418,868	+				-0.4
5,418,869	-				+0.6
5,418,869	-				-0.1
5,418,869	-				-0.1
5,418,899	-				+0.2
5,418,899	-				+0.6
5,418,906	+				+0.1
5,418,906	+				-0.1
5,418,907	-				-2.4
5,418,907	-				-0.5
5,418,907	-				+0.1
5,418,937	+		PS417_24985	0.19	-0.2
5,418,938	-		PS417_24985	0.20	+7.3
5,418,957	+		PS417_24985	0.29	+0.2
5,418,957	+		PS417_24985	0.29	+0.8
5,418,957	+		PS417_24985	0.29	+0.1
5,418,958	-		PS417_24985	0.29	-0.9
5,418,958	-		PS417_24985	0.29	-0.1
5,418,958	-		PS417_24985	0.29	+1.2
5,418,958	-		PS417_24985	0.29	+0.4
5,418,958	-		PS417_24985	0.29	+0.5
5,418,958	-		PS417_24985	0.29	+1.0
5,418,958	-		PS417_24985	0.29	-0.5
5,418,958	-		PS417_24985	0.29	+0.5
5,419,134	+				+0.7
5,419,134	+				-1.1
5,419,134	+				-0.2
5,419,135	-				-0.0
5,419,135	-				+1.0
5,419,148	-				-0.4
5,419,152	+				+1.3
5,419,153	-				-0.2
5,419,153	-				-0.2
5,419,153	-				-0.5
5,419,302	-				+0.2
5,419,374	+				-0.9
5,419,375	-				-0.9
5,419,390	-				+0.7
5,419,390	-				-0.5
5,419,407	+				-0.1
5,419,509	-				-0.3
5,419,509	-				-1.1
5,419,509	-				+0.3
5,419,512	+				-0.8
5,419,513	-				-0.2
5,419,513	-				-0.2
5,419,513	-				+0.0
5,419,647	-		PS417_24990	0.17	-0.1
5,419,647	-		PS417_24990	0.17	-0.8
5,419,907	+		PS417_24990	0.64	-0.4
5,419,908	-		PS417_24990	0.64	+1.3
5,419,909	+		PS417_24990	0.64	-0.0
5,419,917	+		PS417_24990	0.66	-0.2
5,419,987	+		PS417_24990	0.79	+0.2
5,420,021	+		PS417_24990	0.85	-1.9
5,420,083	-				-2.0