Strain Fitness in Pseudomonas simiae WCS417 around PS417_24965

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
5,412,788	-		PS417_24960	0.43	-0.3
5,412,788	-		PS417_24960	0.43	-0.1
5,412,788	-		PS417_24960	0.43	-1.5
5,412,788	-		PS417_24960	0.43	-0.1
5,412,838	+		PS417_24960	0.46	-0.5
5,412,838	+		PS417_24960	0.46	-0.8
5,412,900	+		PS417_24960	0.50	-1.1
5,412,901	-		PS417_24960	0.50	-0.8
5,412,901	-		PS417_24960	0.50	+0.3
5,412,918	+		PS417_24960	0.52	-0.3
5,413,060	+		PS417_24960	0.61	+0.4
5,413,061	-		PS417_24960	0.61	+0.0
5,413,061	-		PS417_24960	0.61	+0.7
5,413,103	+		PS417_24960	0.63	-0.2
5,413,104	-		PS417_24960	0.63	+1.1
5,413,181	+		PS417_24960	0.68	+0.4
5,413,213	+		PS417_24960	0.70	-0.4
5,413,337	+		PS417_24960	0.78	-0.6
5,413,338	-		PS417_24960	0.78	+0.9
5,413,550	+				-0.4
5,413,654	-				+1.2
5,413,654	-				+0.2
5,413,736	+				-0.4
5,413,981	+				+1.2
5,413,981	+		PS417_24965	0.65	+0.8
5,413,981	+				+0.7
5,413,982	-				-0.0
5,413,982	-		PS417_24965	0.65	+1.2
5,413,982	-		PS417_24965	0.65	+0.2
5,414,157	-				-0.3
5,414,178	+				-0.5
5,414,178	+				+0.5
5,414,184	-				-0.3
5,414,213	+				-0.4
5,414,213	+				+0.6
5,414,237	+				-0.3
5,414,237	+				-0.0
5,414,237	+				+0.2
5,414,237	+				+0.8
5,414,400	+				-0.1
5,414,400	+				-0.6
5,414,401	-				+0.7
5,414,401	-				-0.7
5,414,455	-				+0.6
5,414,494	+				-1.2
5,414,526	+				-0.1
5,414,584	+				-0.2
5,414,584	+				+0.4
5,414,585	-				-0.1
5,414,585	-				-0.3
5,414,612	+				+0.4
5,414,612	+				+0.1
5,414,613	-				-0.0
5,414,613	-				-0.2
5,414,724	+				-0.7
5,414,724	+				-1.2
5,414,724	+				-0.9
5,414,725	-				+0.0
5,414,725	-				+0.2
5,414,725	-				-0.2
5,414,725	-				-1.0
5,414,804	-				-0.9
5,414,876	-				-0.4
5,415,090	+				-0.4
5,415,090	+				+0.0
5,415,095	-				+0.3