Strain Fitness in Pseudomonas simiae WCS417 around PS417_24220

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
5,251,760	-		PS417_24210	0.77	-0.4
5,251,865	+		PS417_24210	0.85	-0.5
5,251,865	+		PS417_24210	0.85	-0.9
5,251,922	-		PS417_24210	0.89	+0.0
5,251,925	+		PS417_24210	0.89	-0.0
5,251,926	-		PS417_24210	0.89	+0.2
5,251,960	+				-0.8
5,251,960	+				-0.3
5,251,961	-				+1.0
5,251,961	-				-0.2
5,251,961	-				+0.1
5,251,961	-				-0.4
5,252,062	+				-0.7
5,252,062	+				-0.0
5,252,063	-				-0.3
5,252,063	-				+2.2
5,252,065	+				+0.2
5,252,065	+				-2.3
5,252,065	+				-0.1
5,252,065	+				+0.7
5,252,066	-				+0.8
5,252,081	-				-0.4
5,252,558	+				-0.2
5,252,558	+				+0.5
5,252,558	+				-1.3
5,252,559	-				-0.7
5,252,559	-				-1.1
5,252,559	-				-0.8
5,252,559	-				+0.4
5,252,559	-				-0.5
5,252,562	+				+0.0
5,252,562	+				-0.1
5,252,563	-				+0.2
5,252,563	-				-0.9
5,252,563	-				+0.4
5,252,624	-				+0.2
5,252,624	-				-0.2
5,252,636	-				+1.0
5,252,682	-				+0.5
5,252,698	+				-1.4
5,252,713	+				-0.2
5,253,001	-		PS417_24220	0.13	+0.1
5,253,063	+		PS417_24220	0.17	-0.3
5,253,063	+		PS417_24220	0.17	+1.1
5,253,064	-		PS417_24220	0.17	+0.5
5,253,315	+		PS417_24220	0.31	-0.7
5,253,771	+		PS417_24220	0.56	-0.0
5,253,771	+		PS417_24220	0.56	-0.4
5,253,924	+		PS417_24220	0.64	-0.8
5,254,053	-		PS417_24220	0.71	+1.6
5,254,203	+		PS417_24220	0.79	+0.5
5,254,203	+		PS417_24220	0.79	+1.0
5,254,203	+		PS417_24220	0.79	-0.6
5,254,203	+		PS417_24220	0.79	-0.2
5,254,203	+		PS417_24220	0.79	+0.4
5,254,203	+		PS417_24220	0.79	-0.3
5,254,203	+		PS417_24220	0.79	+5.9
5,254,203	+		PS417_24220	0.79	+0.6
5,254,204	-		PS417_24220	0.79	-0.4
5,254,380	+		PS417_24220	0.89	+3.8
5,254,380	+		PS417_24220	0.89	+0.1
5,254,404	+				-0.8
5,254,404	+				+0.3
5,254,404	+				-0.4
5,254,404	+				+1.6
5,254,405	-				+0.2
5,254,405	-				+0.2
5,254,446	+				+0.1
5,254,473	+				+0.1
5,254,474	-				-0.5
5,254,474	-				+0.4
5,254,474	-				+0.5
5,254,474	-				+1.2
5,254,479	+				+0.6
5,254,480	-				-0.7
5,254,663	+		PS417_24225	0.27	-0.2
5,254,664	-		PS417_24225	0.27	+0.4
5,255,279	+				+0.0
5,255,279	+				-0.6
5,255,279	+				+1.3
5,255,571	-		PS417_24230	0.21	-0.2