Strain Fitness in Pseudomonas simiae WCS417 around PS417_24140

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
5,226,083	+		PS417_24130	0.66	+0.2
5,226,084	-		PS417_24130	0.66	-0.3
5,226,084	-		PS417_24130	0.66	+1.3
5,226,150	+		PS417_24130	0.73	-0.4
5,226,356	+				+0.0
5,226,357	-				+0.2
5,226,357	-				-0.5
5,226,357	-				-0.5
5,226,357	-				+1.4
5,226,360	+				-0.4
5,226,360	+				-1.7
5,226,360	+				+0.0
5,226,360	+				-1.4
5,226,360	+				-0.0
5,226,360	+				+0.2
5,226,360	+				+0.5
5,226,360	+				-0.6
5,226,360	+				+0.3
5,226,360	+				-0.3
5,226,361	-				+0.2
5,226,361	-				-0.2
5,226,361	-				-1.0
5,226,361	-				+0.2
5,226,361	-				+0.2
5,226,361	-				+0.1
5,226,361	-				+0.5
5,226,361	-				-0.2
5,226,531	+		PS417_24135	0.38	+0.7
5,226,532	-		PS417_24135	0.38	-0.6
5,226,868	-				+0.1
5,226,868	-				+0.9
5,226,868	-				+0.3
5,226,988	+		PS417_24140	0.18	+1.0
5,226,988	+		PS417_24140	0.18	-1.0
5,226,988	+		PS417_24140	0.18	-0.1
5,226,989	-				+1.3
5,226,989	-		PS417_24140	0.18	-0.1
5,227,032	+		PS417_24140	0.21	-0.6
5,227,032	+		PS417_24140	0.21	-0.2
5,227,033	-		PS417_24140	0.21	+0.0
5,227,203	+		PS417_24140	0.33	-0.3
5,227,203	+		PS417_24140	0.33	-0.0
5,227,322	-		PS417_24140	0.42	+1.5
5,227,408	-		PS417_24140	0.48	-0.1
5,227,408	-		PS417_24140	0.48	+0.2
5,227,423	+		PS417_24140	0.49	-1.1
5,227,423	+		PS417_24140	0.49	+0.5
5,227,423	+		PS417_24140	0.49	+0.2
5,227,424	-		PS417_24140	0.49	+0.5
5,227,424	-		PS417_24140	0.49	+0.5
5,227,462	+		PS417_24140	0.51	-0.5
5,227,462	+		PS417_24140	0.51	+1.1
5,227,463	-		PS417_24140	0.52	+4.6
5,227,463	-		PS417_24140	0.52	+0.4
5,227,504	-		PS417_24140	0.54	+3.8
5,227,658	+		PS417_24140	0.65	-0.2
5,227,704	+		PS417_24140	0.69	-0.1
5,227,704	+		PS417_24140	0.69	-0.0
5,227,704	+		PS417_24140	0.69	+0.6
5,227,743	-		PS417_24140	0.71	-0.2
5,227,746	-		PS417_24140	0.72	+0.0
5,227,862	+		PS417_24140	0.80	-1.2
5,227,863	-		PS417_24140	0.80	-0.9
5,227,886	+		PS417_24140	0.82	-0.9
5,227,895	-		PS417_24140	0.82	+0.3
5,228,037	+				+0.3
5,228,092	-				-0.4
5,228,116	-				-0.4
5,228,181	+				+0.0
5,228,407	+				-0.4
5,228,539	+				+0.4
5,228,656	-				+0.3
5,228,656	-				-0.4
5,228,656	-				+1.1
5,228,741	-				+1.5
5,228,797	-				+0.5
5,228,844	+				+0.5
5,228,936	-				+0.2
5,228,937	+				-0.3
5,228,937	+				-0.4
5,228,938	-				-0.1
5,228,938	-				-0.1
5,228,977	-				-0.1
5,228,977	-				-0.5