Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22265 and PS417_22270 are separated by 0 nucleotides PS417_22270 and PS417_22275 are separated by 13 nucleotides PS417_22275 and PS417_22280 are separated by 87 nucleotides PS417_22280 and PS417_22285 are separated by 1 nucleotides
PS417_22265: PS417_22265 - chromosome segregation protein ScpA, at 4,824,904 to 4,825,722
_22265
PS417_22270: PS417_22270 - hypothetical protein, at 4,825,723 to 4,826,352
_22270
PS417_22275: PS417_22275 - phosphoesterase, at 4,826,366 to 4,827,229
_22275
PS417_22280: PS417_22280 - septation protein A, at 4,827,317 to 4,827,913
_22280
PS417_22285: PS417_22285 - hypothetical protein, at 4,827,915 to 4,828,214
_22285
Position (kb) 4826
4827
4828 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4825.481 kb on + strand, within PS417_22265 at 4825.482 kb on - strand, within PS417_22265 at 4825.490 kb on + strand, within PS417_22265 at 4825.490 kb on + strand, within PS417_22265 at 4825.491 kb on - strand, within PS417_22265 at 4825.491 kb on - strand, within PS417_22265 at 4825.553 kb on + strand, within PS417_22265 at 4825.619 kb on + strand, within PS417_22265 at 4825.620 kb on - strand, within PS417_22265 at 4825.620 kb on - strand, within PS417_22265 at 4825.620 kb on - strand, within PS417_22265 at 4825.655 kb on + strand at 4825.656 kb on - strand at 4825.656 kb on - strand at 4825.656 kb on - strand at 4826.055 kb on + strand, within PS417_22270 at 4826.063 kb on + strand, within PS417_22270 at 4826.063 kb on + strand, within PS417_22270 at 4826.064 kb on - strand, within PS417_22270 at 4826.360 kb on - strand at 4826.360 kb on - strand at 4826.593 kb on + strand, within PS417_22275 at 4826.594 kb on - strand, within PS417_22275 at 4826.594 kb on - strand, within PS417_22275 at 4826.595 kb on + strand, within PS417_22275 at 4826.595 kb on + strand, within PS417_22275 at 4826.595 kb on + strand, within PS417_22275 at 4826.596 kb on - strand, within PS417_22275 at 4826.638 kb on - strand, within PS417_22275 at 4826.834 kb on - strand, within PS417_22275 at 4826.915 kb on + strand, within PS417_22275 at 4826.997 kb on + strand, within PS417_22275 at 4827.239 kb on + strand at 4827.282 kb on + strand at 4827.282 kb on + strand at 4827.283 kb on - strand at 4827.285 kb on + strand at 4827.285 kb on + strand at 4827.922 kb on - strand at 4828.152 kb on + strand, within PS417_22285 at 4828.152 kb on + strand, within PS417_22285 at 4828.153 kb on - strand, within PS417_22285 at 4828.153 kb on - strand, within PS417_22285 at 4828.153 kb on - strand, within PS417_22285 at 4828.171 kb on - strand, within PS417_22285
Per-strain Table
Position Strand Gene LocusTag Fraction Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X remove 4,825,481 + PS417_22265 0.70 +0.4 4,825,482 - PS417_22265 0.71 +0.1 4,825,490 + PS417_22265 0.72 -2.2 4,825,490 + PS417_22265 0.72 -0.4 4,825,491 - PS417_22265 0.72 -0.4 4,825,491 - PS417_22265 0.72 -0.6 4,825,553 + PS417_22265 0.79 +0.1 4,825,619 + PS417_22265 0.87 +0.6 4,825,620 - PS417_22265 0.87 -0.3 4,825,620 - PS417_22265 0.87 -0.9 4,825,620 - PS417_22265 0.87 +1.0 4,825,655 + +0.5 4,825,656 - -0.4 4,825,656 - +0.2 4,825,656 - +0.6 4,826,055 + PS417_22270 0.53 +0.5 4,826,063 + PS417_22270 0.54 -1.4 4,826,063 + PS417_22270 0.54 -0.9 4,826,064 - PS417_22270 0.54 +0.1 4,826,360 - -0.5 4,826,360 - +1.1 4,826,593 + PS417_22275 0.26 -0.3 4,826,594 - PS417_22275 0.26 -0.1 4,826,594 - PS417_22275 0.26 +3.0 4,826,595 + PS417_22275 0.27 -0.2 4,826,595 + PS417_22275 0.27 -1.4 4,826,595 + PS417_22275 0.27 +3.2 4,826,596 - PS417_22275 0.27 -0.0 4,826,638 - PS417_22275 0.31 +1.1 4,826,834 - PS417_22275 0.54 +1.2 4,826,915 + PS417_22275 0.64 -1.1 4,826,997 + PS417_22275 0.73 -0.3 4,827,239 + +0.1 4,827,282 + +0.5 4,827,282 + +0.3 4,827,283 - +0.8 4,827,285 + +0.0 4,827,285 + -0.6 4,827,922 - +0.2 4,828,152 + PS417_22285 0.79 +0.0 4,828,152 + PS417_22285 0.79 -0.3 4,828,153 - PS417_22285 0.79 +0.1 4,828,153 - PS417_22285 0.79 -0.5 4,828,153 - PS417_22285 0.79 +0.4 4,828,171 - PS417_22285 0.85 +0.3
Or see this region's nucleotide sequence