Strain Fitness in Pseudomonas simiae WCS417 around PS417_19000

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
4,111,385	-				-0.6
4,111,386	+				+0.0
4,111,386	+				+1.0
4,111,387	-				+5.0
4,111,473	-				-0.7
4,111,517	+		PS417_18995	0.15	+1.5
4,111,517	+		PS417_18995	0.15	-0.5
4,111,517	+		PS417_18995	0.15	+0.4
4,111,517	+		PS417_18995	0.15	-0.1
4,111,518	-		PS417_18995	0.15	-1.0
4,111,547	+		PS417_18995	0.19	-1.9
4,111,637	+		PS417_18995	0.30	-0.5
4,111,638	-		PS417_18995	0.30	-0.5
4,111,974	-		PS417_18995	0.73	-0.4
4,111,974	-		PS417_18995	0.73	+2.0
4,112,186	+				-1.1
4,112,186	+				-0.2
4,112,186	+				+0.1
4,112,186	+				+0.3
4,112,186	+				+0.9
4,112,187	-				-0.1
4,112,187	-				+0.7
4,112,187	-				+0.8
4,112,195	+				+0.0
4,112,195	+				+0.1
4,112,195	+				-0.3
4,112,196	-				-0.1
4,112,265	-				-0.4
4,112,432	+		PS417_19000	0.12	+1.7
4,112,432	+		PS417_19000	0.12	-0.0
4,112,593	-		PS417_19000	0.25	+1.1
4,112,593	-				+0.0
4,112,799	+				-0.9
4,112,806	-		PS417_19000	0.43	-0.4
4,112,806	-		PS417_19000	0.43	-0.5
4,112,806	-		PS417_19000	0.43	-0.5
4,112,858	+		PS417_19000	0.47	-0.1
4,112,905	+		PS417_19000	0.51	+0.4
4,112,905	+		PS417_19000	0.51	+3.5
4,112,905	+		PS417_19000	0.51	-0.2
4,112,906	-		PS417_19000	0.51	+0.4
4,113,321	+		PS417_19000	0.85	-1.5
4,113,487	+				-0.3
4,113,488	-				-0.4
4,113,488	-				+0.4
4,113,597	+				+0.4
4,114,316	+				+1.2
4,114,316	+				+2.1
4,114,317	-				-0.5
4,114,317	-				-0.7
4,114,317	-				+0.2
4,114,327	-				+0.5
4,114,327	-				+0.0
4,114,410	-		PS417_19010	0.19	+0.2