Strain Fitness in Pseudomonas simiae WCS417 around PS417_18840

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
4,081,623	+		PS417_18835	0.67	-0.5
4,081,623	+		PS417_18835	0.67	-0.3
4,081,623	+		PS417_18835	0.67	-0.1
4,081,712	+		PS417_18835	0.72	-0.2
4,081,712	+		PS417_18835	0.72	-0.2
4,081,713	-		PS417_18835	0.72	-0.5
4,081,713	-		PS417_18835	0.72	+0.2
4,081,789	+				+1.5
4,081,790	-		PS417_18835	0.77	+2.0
4,081,882	-		PS417_18835	0.82	+1.7
4,081,882	-		PS417_18835	0.82	-0.4
4,081,884	-		PS417_18835	0.82	+1.1
4,082,231	-				-0.0
4,082,233	+				+0.1
4,082,233	+				+0.5
4,082,234	-				-0.3
4,082,438	-				+0.1
4,082,712	+		PS417_18840	0.18	+0.3
4,082,713	-		PS417_18840	0.18	-0.2
4,083,022	-		PS417_18840	0.33	+0.1
4,083,356	+		PS417_18840	0.49	-0.8
4,083,356	+		PS417_18840	0.49	-0.2
4,083,606	-		PS417_18840	0.61	-0.8
4,083,606	-		PS417_18840	0.61	-0.6
4,083,932	+		PS417_18840	0.77	-1.1
4,084,385	-				+0.2
4,084,616	+				+0.0
4,084,646	+				-0.4
4,084,723	-				-0.2
4,084,793	+		PS417_18845	0.15	-0.1
4,084,794	-		PS417_18845	0.15	-0.2
4,084,977	+				+2.2
4,084,978	-		PS417_18845	0.50	-0.6
4,085,069	-		PS417_18845	0.67	-0.8
4,085,237	+				-1.5
4,085,237	+				+0.3
4,085,238	-				-1.0
4,085,238	-				-0.3
4,085,238	-				-0.2
4,085,238	-				-0.2
4,085,238	-				+0.4
4,085,358	+				-0.2
4,085,358	+				-1.1
4,085,359	-				+0.2
4,085,359	-				+2.1
4,085,359	-				-0.8
4,085,359	-				+0.9
4,085,359	-				-0.8
4,085,359	-				-0.2
4,085,359	-				+0.4
4,085,359	-				-0.3