Strain Fitness in Pseudomonas simiae WCS417 around PS417_18450

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
4,012,174	+				-1.1
4,012,175	-				-0.4
4,012,200	+				+0.0
4,012,201	-				+0.7
4,012,207	-				-0.8
4,012,207	-				+0.2
4,012,216	+				+0.1
4,012,314	+		PS417_18445	0.24	-0.4
4,012,381	+		PS417_18445	0.34	-0.1
4,012,496	+		PS417_18445	0.51	+0.1
4,012,804	+				-0.9
4,012,804	+				-0.3
4,012,804	+				-0.3
4,012,804	+				-0.9
4,012,804	+				-0.2
4,012,879	-				-0.5
4,012,879	-				+0.4
4,012,970	+				-1.3
4,012,970	+				-0.4
4,013,014	+				-1.7
4,013,383	-		PS417_18450	0.45	+0.1
4,013,440	-		PS417_18450	0.52	+0.2
4,013,518	-		PS417_18450	0.62	-0.3
4,013,518	-		PS417_18450	0.62	+0.2
4,013,559	+				+0.4
4,013,559	+		PS417_18450	0.68	-0.3
4,013,559	+		PS417_18450	0.68	-0.4
4,013,560	-		PS417_18450	0.68	-1.2
4,013,805	+				-0.3
4,013,806	-				+0.3
4,013,817	+				-0.1
4,013,817	+				+0.3
4,013,931	-				-1.5
4,014,054	+		PS417_18455	0.55	-1.0
4,014,055	-		PS417_18455	0.55	+0.9
4,014,090	+		PS417_18455	0.70	-0.9
4,014,220	+				-0.2
4,014,249	+				-0.2
4,014,279	+		PS417_18460	0.11	+1.1
4,014,465	-		PS417_18460	0.38	-0.5
4,014,660	-		PS417_18460	0.67	+2.7