Strain Fitness in Pseudomonas simiae WCS417 around PS417_18005

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
3,924,468	-		PS417_17995	0.71	+0.1
3,924,692	+		PS417_17995	0.90	+0.0
3,924,692	+		PS417_17995	0.90	+0.3
3,924,805	+				+0.9
3,924,812	+				-0.4
3,924,867	-		PS417_18000	0.13	-0.5
3,924,909	-		PS417_18000	0.20	-0.3
3,924,921	+		PS417_18000	0.22	-0.5
3,925,042	-		PS417_18000	0.43	-0.2
3,925,101	+		PS417_18000	0.54	+0.5
3,925,101	+		PS417_18000	0.54	+0.9
3,925,191	+		PS417_18000	0.69	-0.2
3,925,301	+		PS417_18000	0.89	-0.0
3,925,443	-				-0.1
3,925,449	-				+0.2
3,925,449	-				+0.4
3,925,691	+		PS417_18005	0.12	-1.5
3,925,691	+		PS417_18005	0.12	-0.3
3,925,692	-		PS417_18005	0.12	-0.6
3,925,850	+				+0.0
3,925,925	-		PS417_18005	0.24	-0.0
3,925,925	-		PS417_18005	0.24	-1.1
3,926,086	+		PS417_18005	0.32	-1.0
3,926,087	-		PS417_18005	0.32	-0.9
3,926,097	-		PS417_18005	0.33	+0.1
3,926,233	-		PS417_18005	0.40	-0.0
3,926,422	+				+1.8
3,926,510	-				-0.2
3,926,587	+		PS417_18005	0.58	-0.8
3,926,588	-		PS417_18005	0.58	-1.1
3,926,630	+		PS417_18005	0.60	-0.2
3,926,676	-		PS417_18005	0.63	-0.4
3,926,676	-				+0.2
3,926,741	+		PS417_18005	0.66	-0.5
3,926,769	+		PS417_18005	0.68	-0.3
3,926,913	+		PS417_18005	0.75	-0.1
3,926,913	+		PS417_18005	0.75	-0.3
3,927,025	+		PS417_18005	0.81	-1.6
3,927,075	+		PS417_18005	0.84	-0.4
3,927,075	+		PS417_18005	0.84	+0.0
3,927,076	-		PS417_18005	0.84	+0.2
3,927,176	+		PS417_18005	0.89	-0.9
3,927,251	+				-0.2
3,928,167	-		PS417_18010	0.82	-1.0
3,928,214	+		PS417_18010	0.88	-0.8
3,928,227	-		PS417_18010	0.90	-0.2