Strain Fitness in Pseudomonas simiae WCS417 around PS417_16840

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
3,672,934	-				-0.4
3,673,197	-		PS417_16830	0.88	+0.0
3,673,206	+		PS417_16830	0.89	+0.8
3,673,206	+				+1.0
3,673,206	+		PS417_16830	0.89	-1.7
3,673,207	-		PS417_16830	0.89	-0.3
3,673,429	+				-0.4
3,673,485	-				+0.1
3,673,508	-				+0.7
3,673,736	+		PS417_16835	0.58	-0.3
3,673,737	-		PS417_16835	0.59	-0.1
3,674,032	+				+0.2
3,674,072	-		PS417_16840	0.12	+0.5
3,674,251	+		PS417_16840	0.22	-0.9
3,674,252	-		PS417_16840	0.22	+0.1
3,674,320	+		PS417_16840	0.26	+4.2
3,674,321	-		PS417_16840	0.26	+0.5
3,674,374	+		PS417_16840	0.30	-0.5
3,674,375	-		PS417_16840	0.30	+0.1
3,674,375	-		PS417_16840	0.30	-0.5
3,674,432	-		PS417_16840	0.33	+0.1
3,674,734	+		PS417_16840	0.51	+0.3
3,674,734	+		PS417_16840	0.51	+0.7
3,674,735	-		PS417_16840	0.51	-0.4
3,674,735	-		PS417_16840	0.51	+0.2
3,675,364	+		PS417_16840	0.88	+0.1
3,675,440	-				+1.1
3,675,481	+				-0.9
3,675,481	+				-0.5
3,675,695	-		PS417_16845	0.29	-0.3
3,675,766	+		PS417_16845	0.43	-0.2
3,675,767	-		PS417_16845	0.43	+0.0
3,675,914	+				+1.0
3,676,011	+				-0.3
3,676,011	+				-0.6
3,676,011	+				+0.0
3,676,012	-				-2.4
3,676,012	-				-0.4
3,676,163	+		PS417_16850	0.44	+0.1
3,676,164	-		PS417_16850	0.44	-0.2
3,676,226	+		PS417_16850	0.67	-0.0
3,676,358	+		PS417_16855	0.13	+1.1