Strain Fitness in Pseudomonas simiae WCS417 around PS417_15535

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
3,399,646	+				-1.7
3,399,825	+		PS417_15530	0.32	+0.3
3,399,826	-		PS417_15530	0.32	+0.5
3,399,826	-		PS417_15530	0.32	-1.0
3,399,826	-		PS417_15530	0.32	-0.6
3,399,928	+		PS417_15530	0.48	-0.0
3,399,929	-		PS417_15530	0.49	+0.0
3,400,053	+		PS417_15530	0.68	-0.3
3,400,065	-		PS417_15530	0.70	+1.3
3,400,076	+		PS417_15530	0.72	-0.0
3,400,077	-		PS417_15530	0.72	-0.0
3,400,077	-		PS417_15530	0.72	-0.5
3,400,286	+				+0.6
3,400,287	-				-0.8
3,400,287	-				-0.0
3,400,287	-				-1.0
3,400,287	-				-1.9
3,400,290	+				-0.7
3,400,316	+				-0.4
3,400,317	-				-0.8
3,400,692	+		PS417_15535	0.41	-0.3
3,400,692	+		PS417_15535	0.41	+1.1
3,400,734	+		PS417_15535	0.45	+8.5
3,401,026	-		PS417_15535	0.75	+0.3
3,401,059	-				+1.0
3,401,107	-		PS417_15535	0.83	-1.3
3,401,199	+				-0.1
3,401,339	+				+0.9
3,401,404	+				+0.4
3,401,662	+		PS417_15540	0.73	+0.3
3,401,686	-		PS417_15540	0.80	-0.1
3,401,757	+				+0.5
3,401,758	-				-0.7
3,401,758	-				-1.9
3,401,758	-				-0.1
3,401,823	-				-0.0
3,402,130	-		PS417_15545	0.12	+0.1
3,402,130	-		PS417_15545	0.12	+0.1
3,402,207	+		PS417_15545	0.15	+1.0