Strain Fitness in Pseudomonas simiae WCS417 around PS417_14735

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
3,217,378	+		PS417_14730	0.86	+0.2
3,217,506	-				+0.1
3,217,596	+				-0.7
3,217,597	-				-0.5
3,217,729	+				-1.4
3,217,730	-				-0.6
3,217,731	+				+0.5
3,217,732	-				+0.1
3,217,973	+				-0.9
3,217,976	-				+4.0
3,218,391	+				-0.1
3,218,506	+				+0.3
3,218,549	+				+0.0
3,218,626	+				+0.0
3,218,626	+				+0.0
3,218,626	+				+0.9
3,218,626	+				-0.2
3,218,626	+				-0.0
3,218,626	+				-1.7
3,218,627	-				-1.0
3,218,659	+				+0.3
3,218,691	-				+0.4
3,218,749	+		PS417_14735	0.11	+0.1
3,219,091	+		PS417_14735	0.20	+1.5
3,219,091	+		PS417_14735	0.20	+0.1
3,219,343	+		PS417_14735	0.26	+0.4
3,219,343	+		PS417_14735	0.26	+0.0
3,219,806	-		PS417_14735	0.38	+5.8
3,220,029	+		PS417_14735	0.43	+0.1
3,220,558	+		PS417_14735	0.56	+0.3
3,221,203	+		PS417_14735	0.73	+0.4
3,221,302	+		PS417_14735	0.75	+0.9
3,221,302	+		PS417_14735	0.75	-0.1
3,221,545	-		PS417_14735	0.81	-0.9
3,221,742	+				+0.4
3,221,743	-		PS417_14735	0.86	+0.3
3,221,977	+				-0.3
3,222,136	+				-1.2
3,222,137	-				-0.9
3,222,137	-				-1.1
3,222,137	-				-0.4
3,222,239	-				+0.4
3,222,343	-				-0.1
3,222,393	-				+0.6
3,222,454	+				-0.8
3,222,463	-				-0.9
3,222,657	-		PS417_14740	0.11	-0.2
3,222,849	-		PS417_14740	0.21	-0.7
3,222,924	-		PS417_14740	0.25	-0.6
3,222,924	-		PS417_14740	0.25	-0.2
3,222,927	-		PS417_14740	0.25	+1.2
3,223,217	+		PS417_14740	0.40	-0.1
3,223,217	+		PS417_14740	0.40	-0.0
3,223,218	-		PS417_14740	0.40	-0.5
3,223,259	+		PS417_14740	0.42	-0.1
3,223,259	+		PS417_14740	0.42	-0.5
3,223,261	+		PS417_14740	0.42	-0.5