Strain Fitness in Pseudomonas simiae WCS417 around PS417_13525

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,980,761	-		PS417_13520	0.58	+4.1
2,980,841	+				+0.9
2,980,841	+		PS417_13520	0.64	-0.3
2,980,842	-		PS417_13520	0.64	+0.5
2,980,883	+		PS417_13520	0.67	-0.7
2,980,884	-		PS417_13520	0.67	+0.6
2,980,884	-		PS417_13520	0.67	-0.2
2,980,886	+		PS417_13520	0.67	+0.4
2,980,886	+		PS417_13520	0.67	+1.0
2,980,887	-				+0.1
2,980,887	-		PS417_13520	0.67	-0.2
2,980,887	-		PS417_13520	0.67	-1.3
2,980,935	-				+1.4
2,980,935	-		PS417_13520	0.71	-0.2
2,980,935	-		PS417_13520	0.71	-0.8
2,981,042	+		PS417_13520	0.78	+0.2
2,981,042	+		PS417_13520	0.78	-0.1
2,981,042	+				-0.6
2,981,042	+		PS417_13520	0.78	-0.6
2,981,042	+		PS417_13520	0.78	+0.5
2,981,043	-		PS417_13520	0.78	+0.1
2,981,043	-		PS417_13520	0.78	-1.1
2,981,043	-				+0.4
2,981,043	-		PS417_13520	0.78	+0.3
2,981,181	-		PS417_13520	0.88	+0.2
2,981,181	-		PS417_13520	0.88	+0.8
2,981,181	-		PS417_13520	0.88	-0.3
2,981,449	+				-0.2
2,981,801	-		PS417_13525	0.19	-0.9
2,981,845	-		PS417_13525	0.27	+0.2
2,981,854	+		PS417_13525	0.29	+5.7
2,982,014	-		PS417_13525	0.58	+0.9
2,982,277	+				-1.8
2,982,278	-				-0.2
2,982,278	-				-0.8
2,982,309	-				+1.9
2,982,400	+				-0.8
2,982,401	-				+1.0
2,982,623	-				-0.3
2,982,623	-				+1.2
2,982,646	-				+0.3
2,982,668	-				+0.3
2,982,774	+				+0.7
2,982,778	-		PS417_13540	0.12	-0.0
2,982,778	-		PS417_13540	0.12	-0.2
2,982,933	-		PS417_13540	0.24	-0.1
2,983,233	+		PS417_13540	0.46	+0.4
2,983,233	+		PS417_13540	0.46	+0.9