Strain Fitness in Pseudomonas simiae WCS417 around PS417_12025

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
2,610,979	+		PS417_12020	0.15	-0.2
2,610,979	+		PS417_12020	0.15	-0.3
2,610,980	-		PS417_12020	0.15	+0.2
2,611,484	-		PS417_12020	0.64	+0.1
2,611,697	-		PS417_12020	0.85	-0.3
2,611,741	+		PS417_12020	0.89	+0.2
2,611,742	-		PS417_12020	0.89	+0.5
2,612,450	+		PS417_12025	0.31	-0.4
2,612,451	-		PS417_12025	0.31	-1.0
2,612,788	+		PS417_12025	0.53	-0.4
2,612,789	-		PS417_12025	0.53	-0.4
2,612,797	+		PS417_12025	0.54	+0.1
2,612,798	-		PS417_12025	0.54	+5.6
2,613,033	-		PS417_12025	0.69	+1.1
2,613,353	+		PS417_12025	0.90	+0.5
2,613,353	+				+0.3
2,613,354	-				+0.7
2,613,478	+				-0.3
2,613,569	-				+0.8
2,613,569	-				-0.1
2,613,693	-				+0.3
2,614,094	-		PS417_12030	0.49	-0.3
2,614,094	-		PS417_12030	0.49	+0.5
2,614,094	-		PS417_12030	0.49	-0.4
2,614,161	-		PS417_12030	0.56	-1.0