Strain Fitness in Pseudomonas simiae WCS417 around PS417_07645

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,685,402	+		PS417_07640	0.67	+0.8
1,685,640	-		PS417_07640	0.83	+0.2
1,685,649	-		PS417_07640	0.84	-0.3
1,685,788	-				-1.7
1,685,792	+				+1.7
1,685,885	+				-1.0
1,685,885	+				+0.3
1,685,917	+				-0.4
1,685,935	-				-0.4
1,686,003	+				-1.1
1,686,004	-				+0.0
1,686,258	+		PS417_07645	0.33	+0.3
1,686,258	+		PS417_07645	0.33	-2.2
1,686,258	+		PS417_07645	0.33	-0.1
1,686,259	-		PS417_07645	0.33	+0.3
1,686,333	+		PS417_07645	0.47	+0.5
1,686,333	+				+0.7
1,686,334	-		PS417_07645	0.47	-1.1
1,686,334	-		PS417_07645	0.47	-0.7
1,686,377	+		PS417_07645	0.55	-0.5
1,686,377	+		PS417_07645	0.55	-0.1
1,686,377	+		PS417_07645	0.55	+1.0
1,686,378	-		PS417_07645	0.55	+0.1
1,686,378	-		PS417_07645	0.55	-0.1
1,686,378	-		PS417_07645	0.55	-1.1
1,686,381	-		PS417_07645	0.56	-0.8
1,686,446	+		PS417_07645	0.68	-0.4
1,686,446	+		PS417_07645	0.68	-2.5
1,686,447	-		PS417_07645	0.68	-0.3
1,686,447	-		PS417_07645	0.68	-0.9
1,686,480	-		PS417_07645	0.75	-1.1
1,686,480	-		PS417_07645	0.75	+0.1
1,686,590	-				+0.2
1,686,590	-				+0.2
1,686,592	+				-0.5
1,686,615	+				-0.0
1,686,616	-				+0.8
1,686,631	-				-0.6
1,686,631	-				+2.4
1,686,651	+				-0.4
1,686,673	+				-0.2
1,686,694	-				+1.9
1,686,711	+				-0.3
1,686,733	+				+0.8
1,686,733	+				-0.3
1,686,733	+				+0.0
1,686,733	+				-0.8
1,686,735	+				+0.1
1,686,735	+				+1.3
1,686,735	+				-2.3
1,686,736	-				-0.3
1,686,736	-				+0.5
1,686,736	-				-0.3
1,686,736	-				-0.7
1,686,737	+				-0.2
1,686,737	+				-0.1
1,686,738	-				-0.3
1,686,738	-				-0.2
1,686,738	-				-0.7
1,686,738	-				+1.8
1,686,738	-				-0.1