Strain Fitness in Pseudomonas simiae WCS417 around PS417_07290

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X
1,606,586	+		PS417_07285	0.40	-0.1
1,606,586	+				-0.0
1,606,586	+		PS417_07285	0.40	+0.3
1,606,587	-		PS417_07285	0.41	+0.7
1,606,587	-		PS417_07285	0.41	+0.4
1,606,590	-		PS417_07285	0.41	+0.2
1,606,610	-		PS417_07285	0.43	-1.1
1,606,620	-		PS417_07285	0.43	-0.4
1,606,871	+		PS417_07285	0.64	-0.1
1,607,032	+		PS417_07285	0.78	-0.3
1,607,158	+		PS417_07285	0.89	-0.6
1,607,219	-				-1.1
1,607,219	-				+1.1
1,607,219	-				-0.1
1,607,219	-				+0.1
1,607,507	+				-0.0
1,607,591	+				+1.8
1,607,763	+		PS417_07290	0.18	-0.6
1,607,773	+		PS417_07290	0.19	+0.3
1,607,828	-		PS417_07290	0.22	+0.2
1,607,952	-		PS417_07290	0.31	-1.8
1,608,375	+		PS417_07290	0.60	-0.7
1,608,614	+		PS417_07290	0.77	-0.7
1,608,614	+		PS417_07290	0.77	-1.0
1,608,615	-		PS417_07290	0.77	-0.3
1,608,617	+		PS417_07290	0.77	-0.8
1,608,617	+		PS417_07290	0.77	-0.7
1,608,618	-		PS417_07290	0.77	-0.4
1,608,742	+		PS417_07290	0.86	-0.3
1,608,923	+				-0.3
1,608,923	+				+1.7
1,608,923	+				-0.0
1,608,924	-				-0.5
1,608,924	-				-0.0
1,608,924	-				-0.3
1,608,924	-				+0.1
1,608,924	-				-0.3
1,608,924	-				-0.6
1,608,924	-				+0.6
1,608,924	-				-0.5
1,608,949	-				+0.3
1,609,108	+		PS417_07295	0.10	-0.2
1,609,108	+		PS417_07295	0.10	-0.2
1,609,109	-		PS417_07295	0.10	-0.7
1,609,109	-		PS417_07295	0.10	-0.9
1,609,150	+		PS417_07295	0.13	+2.2
1,609,150	+		PS417_07295	0.13	-0.4
1,609,151	-		PS417_07295	0.13	-0.3
1,609,168	+		PS417_07295	0.14	+0.8
1,609,639	-				-1.5
1,609,771	-		PS417_07295	0.51	-0.1
1,609,771	-		PS417_07295	0.51	+0.2