Strain Fitness in Pseudomonas simiae WCS417 around PS417_23405

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
5,065,977	+		PS417_23400	0.41	+0.2
5,065,977	+		PS417_23400	0.41	+0.1
5,065,978	-		PS417_23400	0.41	+1.0
5,065,978	-		PS417_23400	0.41	-0.5
5,065,978	-		PS417_23400	0.41	-0.0
5,066,055	+		PS417_23400	0.48	-0.4
5,066,055	+		PS417_23400	0.48	+0.0
5,066,056	-		PS417_23400	0.48	-0.6
5,066,103	+		PS417_23400	0.52	-0.1
5,066,103	+		PS417_23400	0.52	-0.6
5,066,103	+		PS417_23400	0.52	-0.3
5,066,103	+				-0.7
5,066,103	+		PS417_23400	0.52	+1.0
5,066,103	+		PS417_23400	0.52	-0.2
5,066,103	+		PS417_23400	0.52	-1.3
5,066,103	+		PS417_23400	0.52	-0.3
5,066,104	-		PS417_23400	0.52	-0.3
5,066,104	-		PS417_23400	0.52	+0.3
5,066,154	+		PS417_23400	0.56	+0.1
5,066,348	+		PS417_23400	0.72	+0.5
5,066,484	+		PS417_23400	0.84	+0.0
5,066,485	-		PS417_23400	0.84	+0.3
5,066,736	-				-1.9
5,066,764	+				-0.3
5,066,801	+				+0.5
5,066,910	+				-0.1
5,066,911	-				-0.0
5,066,911	-				-0.1
5,066,911	-				+0.1
5,066,911	-				+1.4
5,066,913	+				-0.3
5,066,914	-				-0.7
5,067,119	+		PS417_23405	0.19	-0.2
5,067,317	-		PS417_23405	0.32	+0.0
5,067,347	+		PS417_23405	0.34	+0.6
5,068,013	+		PS417_23405	0.78	-1.0
5,068,013	+		PS417_23405	0.78	-0.4
5,068,014	-		PS417_23405	0.78	-0.5
5,068,220	+				-0.3
5,068,332	+				+1.0
5,068,343	+				-0.3
5,068,344	-				-0.7
5,068,381	+				+0.2
5,068,382	-				-0.2
5,068,550	+		PS417_23410	0.15	-0.1
5,068,551	-		PS417_23410	0.15	-0.3
5,068,694	+		PS417_23410	0.30	+0.1
5,068,694	+		PS417_23410	0.30	+1.5
5,068,695	-		PS417_23410	0.30	+0.1
5,068,742	+		PS417_23410	0.36	-0.1
5,068,743	-		PS417_23410	0.36	+0.1
5,068,766	+		PS417_23410	0.38	+0.6
5,068,767	-				+0.0
5,068,977	+		PS417_23410	0.61	+0.1
5,069,095	+		PS417_23410	0.74	-0.3
5,069,096	-		PS417_23410	0.74	+0.3
5,069,308	+				-0.2
5,069,313	-				+0.0