Strain Fitness in Pseudomonas simiae WCS417 around PS417_11670
Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X |
|---|---|---|---|---|---|
| remove | |||||
| 2,510,519 | - | PS417_11665 | 0.57 | -0.0 | |
| 2,510,865 | + | -0.0 | |||
| 2,510,938 | + | -0.2 | |||
| 2,510,944 | - | +0.3 | |||
| 2,510,962 | - | -0.7 | |||
| 2,511,093 | + | +0.2 | |||
| 2,511,094 | - | +0.2 | |||
| 2,511,843 | + | PS417_11670 | 0.63 | +0.3 | |
| 2,511,844 | - | PS417_11670 | 0.63 | -0.2 | |
| 2,511,996 | + | PS417_11670 | 0.75 | -0.7 | |
| 2,512,206 | + | +0.3 | |||
| 2,512,206 | + | -0.4 | |||
| 2,512,206 | + | -0.4 | |||
| 2,512,914 | + | -0.0 | |||
| 2,512,980 | - | -0.3 | |||
| 2,513,105 | - | -0.5 | |||
| 2,513,216 | - | PS417_11680 | 0.14 | -0.7 | |
| 2,513,216 | - | PS417_11680 | 0.14 | -0.2 | |
| 2,513,216 | - | PS417_11680 | 0.14 | +0.3 |
Or see this region's nucleotide sequence