Strain Fitness in Escherichia coli BW25113 around b2190
Experiment: M9 Glucose 2%, 20 mM NO3- anaerobic
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | M9 Glucose 2%, 20 mM NO3- anaerobic |
---|---|---|---|---|---|
remove | |||||
2,283,474 | - | yejM | b2188 | 0.61 | -2.2 |
2,283,688 | + | yejM | b2188 | 0.73 | -2.2 |
2,283,688 | + | yejM | b2188 | 0.73 | -2.1 |
2,283,712 | - | yejM | b2188 | 0.75 | -1.9 |
2,283,752 | + | yejM | b2188 | 0.77 | -1.4 |
2,283,752 | + | yejM | b2188 | 0.77 | -1.8 |
2,283,752 | + | yejM | b2188 | 0.77 | -1.9 |
2,283,758 | - | yejM | b2188 | 0.77 | -1.7 |
2,283,760 | - | yejM | b2188 | 0.77 | -1.9 |
2,283,789 | + | yejM | b2188 | 0.79 | -0.7 |
2,283,797 | + | yejM | b2188 | 0.79 | -1.7 |
2,283,875 | + | yejM | b2188 | 0.84 | -2.0 |
2,283,875 | + | yejM | b2188 | 0.84 | -2.3 |
2,283,900 | - | yejM | b2188 | 0.85 | -2.1 |
2,283,910 | - | yejM | b2188 | 0.86 | -1.4 |
2,283,917 | - | yejM | b2188 | 0.86 | -1.6 |
2,283,980 | - | yejM | b2188 | 0.90 | -1.7 |
2,284,005 | + | -0.4 | |||
2,284,005 | + | +0.1 | |||
2,284,005 | + | -0.0 | |||
2,284,051 | - | -2.8 | |||
2,284,051 | - | -1.7 | |||
2,284,056 | - | -2.1 | |||
2,284,205 | + | +0.2 | |||
2,284,255 | - | proL | b2189 | 0.29 | -0.4 |
2,284,384 | - | +0.2 | |||
2,284,395 | - | +0.4 | |||
2,284,454 | + | +0.3 | |||
2,284,454 | + | +0.4 | |||
2,284,462 | - | +0.1 | |||
2,284,479 | - | +0.3 | |||
2,284,506 | + | +0.3 | |||
2,284,528 | - | +0.1 | |||
2,284,528 | - | +0.0 | |||
2,284,606 | - | +0.1 | |||
2,284,606 | - | +0.4 | |||
2,284,667 | + | yejO | b2190 | 0.10 | +0.1 |
2,284,704 | + | yejO | b2190 | 0.12 | +0.0 |
2,284,729 | - | yejO | b2190 | 0.13 | +0.5 |
2,284,729 | - | yejO | b2190 | 0.13 | +0.5 |
2,284,748 | - | yejO | b2190 | 0.13 | +0.1 |
2,284,755 | - | yejO | b2190 | 0.14 | +0.2 |
2,284,764 | - | yejO | b2190 | 0.14 | +0.3 |
2,284,764 | - | yejO | b2190 | 0.14 | +0.1 |
2,284,795 | - | yejO | b2190 | 0.15 | +0.0 |
2,284,795 | - | yejO | b2190 | 0.15 | +0.0 |
2,284,796 | - | yejO | b2190 | 0.15 | -0.7 |
2,284,796 | - | yejO | b2190 | 0.15 | +0.1 |
2,284,932 | + | yejO | b2190 | 0.21 | +0.5 |
2,284,982 | - | yejO | b2190 | 0.23 | +0.0 |
2,284,982 | - | yejO | b2190 | 0.23 | -0.3 |
2,284,993 | + | yejO | b2190 | 0.23 | +0.2 |
2,285,000 | + | yejO | b2190 | 0.23 | +0.3 |
2,285,001 | - | yejO | b2190 | 0.23 | +0.3 |
2,285,126 | + | yejO | b2190 | 0.28 | +0.4 |
2,285,258 | - | yejO | b2190 | 0.34 | -0.1 |
2,285,265 | - | -0.5 | |||
2,285,265 | - | yejO | b2190 | 0.34 | +0.1 |
2,285,369 | - | yejO | b2190 | 0.38 | +0.3 |
2,285,374 | - | yejO | b2190 | 0.38 | -0.1 |
2,285,383 | - | yejO | b2190 | 0.38 | +0.1 |
2,285,383 | - | yejO | b2190 | 0.38 | -0.1 |
2,285,443 | + | yejO | b2190 | 0.41 | -0.1 |
2,285,458 | + | yejO | b2190 | 0.41 | +0.1 |
2,285,458 | + | yejO | b2190 | 0.41 | +0.0 |
2,285,458 | + | yejO | b2190 | 0.41 | +0.7 |
2,285,458 | + | yejO | b2190 | 0.41 | +0.3 |
2,285,458 | + | yejO | b2190 | 0.41 | +0.2 |
2,285,458 | + | yejO | b2190 | 0.41 | +0.6 |
2,285,466 | - | yejO | b2190 | 0.42 | +0.3 |
2,285,466 | - | yejO | b2190 | 0.42 | +0.0 |
2,285,490 | - | yejO | b2190 | 0.43 | +0.2 |
2,285,546 | - | yejO | b2190 | 0.45 | -0.3 |
2,285,546 | - | yejO | b2190 | 0.45 | -0.2 |
2,285,546 | - | yejO | b2190 | 0.45 | +0.2 |
2,285,570 | + | yejO | b2190 | 0.46 | +0.3 |
2,285,604 | - | yejO | b2190 | 0.47 | +0.5 |
2,285,650 | + | yejO | b2190 | 0.49 | +0.3 |
2,285,669 | - | yejO | b2190 | 0.50 | +0.2 |
2,285,737 | - | yejO | b2190 | 0.52 | +0.0 |
2,285,774 | + | yejO | b2190 | 0.54 | +0.2 |
2,285,899 | + | yejO | b2190 | 0.59 | +0.1 |
2,285,938 | + | yejO | b2190 | 0.60 | -0.5 |
2,285,938 | + | yejO | b2190 | 0.60 | -0.5 |
2,286,026 | - | yejO | b2190 | 0.64 | +0.0 |
2,286,042 | + | yejO | b2190 | 0.65 | +0.0 |
2,286,052 | - | yejO | b2190 | 0.65 | +0.2 |
2,286,102 | + | yejO | b2190 | 0.67 | -0.8 |
2,286,118 | + | yejO | b2190 | 0.68 | -0.2 |
2,286,121 | + | yejO | b2190 | 0.68 | -0.4 |
2,286,121 | - | yejO | b2190 | 0.68 | -0.2 |
2,286,121 | - | yejO | b2190 | 0.68 | -0.2 |
2,286,165 | - | yejO | b2190 | 0.69 | -1.4 |
2,286,165 | - | yejO | b2190 | 0.69 | -0.7 |
2,286,301 | - | yejO | b2190 | 0.75 | -0.2 |
2,286,302 | - | yejO | b2190 | 0.75 | -0.0 |
2,286,319 | + | yejO | b2190 | 0.76 | -3.4 |
2,286,327 | - | yejO | b2190 | 0.76 | -0.9 |
2,286,330 | + | +0.5 | |||
2,286,430 | - | yejO | b2190 | 0.80 | -0.4 |
2,286,432 | + | yejO | b2190 | 0.80 | -3.8 |
2,286,462 | + | +0.0 | |||
2,286,470 | - | yejO | b2190 | 0.82 | +0.0 |
2,286,470 | - | yejO | b2190 | 0.82 | +0.3 |
2,286,531 | + | yejO | b2190 | 0.84 | -3.0 |
2,286,532 | + | yejO | b2190 | 0.84 | -3.7 |
2,286,541 | + | yejO | b2190 | 0.84 | -2.7 |
2,286,554 | + | yejO | b2190 | 0.85 | -1.2 |
2,286,554 | + | yejO | b2190 | 0.85 | -0.2 |
2,286,573 | - | yejO | b2190 | 0.86 | -0.4 |
2,286,621 | + | yejO | b2190 | 0.87 | -0.4 |
2,286,623 | + | yejO | b2190 | 0.88 | -0.2 |
2,286,623 | + | yejO | b2190 | 0.88 | -0.3 |
2,286,631 | - | yejO | b2190 | 0.88 | +0.2 |
2,286,643 | + | yejO | b2190 | 0.88 | -0.1 |
2,286,644 | - | yejO | b2190 | 0.88 | -1.0 |
2,286,654 | + | yejO | b2190 | 0.89 | -2.6 |
2,286,654 | + | yejO | b2190 | 0.89 | -0.7 |
2,286,676 | - | yejO | b2190 | 0.90 | -1.4 |
2,286,681 | - | yejO | b2190 | 0.90 | -2.3 |
2,286,681 | - | yejO | b2190 | 0.90 | -0.5 |
2,286,725 | + | -0.8 | |||
2,286,750 | + | -1.5 | |||
2,286,751 | - | -0.4 | |||
2,286,751 | - | -0.8 | |||
2,286,878 | - | +0.1 | |||
2,286,880 | - | +0.2 | |||
2,286,885 | - | +0.1 | |||
2,286,888 | - | +0.3 | |||
2,286,888 | - | +0.2 | |||
2,286,890 | - | +0.4 | |||
2,286,892 | - | +0.4 | |||
2,286,892 | - | -0.1 | |||
2,286,892 | - | +0.5 | |||
2,286,892 | - | +0.4 | |||
2,286,892 | - | +0.2 | |||
2,286,901 | - | -0.2 | |||
2,286,901 | - | +0.4 | |||
2,286,902 | - | +0.6 | |||
2,286,902 | - | +0.3 | |||
2,286,902 | - | +0.3 | |||
2,286,902 | - | +0.4 | |||
2,286,902 | - | +0.3 | |||
2,286,902 | - | +0.3 | |||
2,286,902 | - | +0.2 | |||
2,286,902 | - | +0.2 | |||
2,286,902 | - | +0.1 | |||
2,286,902 | - | +0.1 | |||
2,286,902 | - | +0.1 | |||
2,286,912 | - | +0.2 | |||
2,286,912 | - | +0.0 | |||
2,286,924 | - | +0.1 | |||
2,286,931 | - | +0.2 | |||
2,286,931 | - | +0.1 | |||
2,286,943 | - | -0.1 | |||
2,286,943 | - | +0.4 | |||
2,286,975 | - | +0.0 | |||
2,286,975 | - | +0.3 | |||
2,286,980 | - | +0.1 |
Or see this region's nucleotide sequence