Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rna and rnk are separated by 229 nucleotides rnk and NOLOHH_23865 are separated by 137 nucleotides NOLOHH_23865 and ybdR are separated by 3 nucleotides
NOLOHH_23855: rna - ribonuclease I, at 4,694,920 to 4,695,726
rna
NOLOHH_23860: rnk - nucleoside diphosphate kinase regulator, at 4,695,956 to 4,696,366
rnk
NOLOHH_23865: NOLOHH_23865 - hypothetical protein, at 4,696,504 to 4,696,593
_23865
NOLOHH_23870: ybdR - Uncharacterized zinc-type alcohol dehydrogenase-like protein YbdR, at 4,696,597 to 4,697,835
ybdR
Position (kb) 4695
4696
4697 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4695.010 kb on + strand, within rna at 4695.029 kb on - strand, within rna at 4695.088 kb on - strand, within rna at 4695.149 kb on + strand, within rna at 4695.149 kb on + strand, within rna at 4695.149 kb on + strand, within rna at 4695.150 kb on - strand, within rna at 4695.150 kb on - strand, within rna at 4695.174 kb on + strand, within rna at 4695.251 kb on + strand, within rna at 4695.323 kb on + strand, within rna at 4695.370 kb on + strand, within rna at 4695.418 kb on + strand, within rna at 4695.418 kb on + strand, within rna at 4695.427 kb on - strand, within rna at 4695.491 kb on - strand, within rna at 4695.495 kb on + strand, within rna at 4695.495 kb on + strand, within rna at 4695.572 kb on + strand, within rna at 4695.573 kb on - strand, within rna at 4695.595 kb on + strand, within rna at 4695.596 kb on - strand, within rna at 4695.738 kb on - strand at 4695.750 kb on - strand at 4695.786 kb on + strand at 4695.786 kb on + strand at 4695.786 kb on + strand at 4695.787 kb on - strand at 4695.787 kb on - strand at 4695.790 kb on + strand at 4695.790 kb on + strand at 4695.790 kb on + strand at 4695.790 kb on + strand at 4695.791 kb on - strand at 4695.791 kb on - strand at 4695.791 kb on - strand at 4695.857 kb on + strand at 4695.872 kb on + strand at 4695.911 kb on + strand at 4695.911 kb on + strand at 4695.912 kb on - strand at 4695.912 kb on - strand at 4695.918 kb on - strand at 4695.971 kb on - strand at 4696.184 kb on + strand, within rnk at 4696.205 kb on - strand, within rnk at 4696.331 kb on + strand at 4696.386 kb on - strand at 4696.520 kb on - strand, within NOLOHH_23865 at 4696.520 kb on - strand, within NOLOHH_23865 at 4696.601 kb on - strand at 4696.601 kb on - strand at 4696.601 kb on - strand at 4696.753 kb on - strand, within ybdR at 4696.753 kb on - strand, within ybdR at 4696.753 kb on - strand, within ybdR at 4696.755 kb on - strand, within ybdR at 4696.755 kb on - strand, within ybdR at 4696.755 kb on - strand, within ybdR at 4696.807 kb on + strand, within ybdR at 4696.808 kb on - strand, within ybdR at 4696.849 kb on - strand, within ybdR at 4696.897 kb on - strand, within ybdR at 4696.897 kb on - strand, within ybdR at 4696.923 kb on + strand, within ybdR at 4696.923 kb on + strand, within ybdR at 4696.953 kb on + strand, within ybdR at 4696.953 kb on + strand, within ybdR at 4697.050 kb on + strand, within ybdR at 4697.054 kb on - strand, within ybdR at 4697.091 kb on + strand, within ybdR
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 4,695,010 + rna NOLOHH_23855 0.11 -2.1 4,695,029 - rna NOLOHH_23855 0.14 -2.1 4,695,088 - rna NOLOHH_23855 0.21 -1.0 4,695,149 + rna NOLOHH_23855 0.28 -0.0 4,695,149 + rna NOLOHH_23855 0.28 +0.8 4,695,149 + rna NOLOHH_23855 0.28 +0.6 4,695,150 - rna NOLOHH_23855 0.29 +0.4 4,695,150 - rna NOLOHH_23855 0.29 +0.4 4,695,174 + rna NOLOHH_23855 0.31 -0.6 4,695,251 + rna NOLOHH_23855 0.41 -0.1 4,695,323 + rna NOLOHH_23855 0.50 +0.7 4,695,370 + rna NOLOHH_23855 0.56 +0.4 4,695,418 + rna NOLOHH_23855 0.62 -0.2 4,695,418 + rna NOLOHH_23855 0.62 +0.1 4,695,427 - rna NOLOHH_23855 0.63 -0.6 4,695,491 - rna NOLOHH_23855 0.71 +0.1 4,695,495 + rna NOLOHH_23855 0.71 +0.3 4,695,495 + rna NOLOHH_23855 0.71 +1.0 4,695,572 + rna NOLOHH_23855 0.81 -1.4 4,695,573 - rna NOLOHH_23855 0.81 -0.0 4,695,595 + rna NOLOHH_23855 0.84 +0.9 4,695,596 - rna NOLOHH_23855 0.84 -0.7 4,695,738 - -0.5 4,695,750 - +2.4 4,695,786 + +0.0 4,695,786 + +0.6 4,695,786 + +0.2 4,695,787 - +0.9 4,695,787 - -1.6 4,695,790 + -1.1 4,695,790 + -1.6 4,695,790 + +1.0 4,695,790 + -0.8 4,695,791 - -0.6 4,695,791 - -1.9 4,695,791 - +0.9 4,695,857 + +0.4 4,695,872 + +0.4 4,695,911 + +0.1 4,695,911 + +0.2 4,695,912 - +0.4 4,695,912 - +0.4 4,695,918 - +0.8 4,695,971 - +1.1 4,696,184 + rnk NOLOHH_23860 0.55 +0.3 4,696,205 - rnk NOLOHH_23860 0.61 +0.2 4,696,331 + +1.3 4,696,386 - -0.1 4,696,520 - NOLOHH_23865 0.18 +1.0 4,696,520 - NOLOHH_23865 0.18 -0.1 4,696,601 - -0.9 4,696,601 - -0.1 4,696,601 - +0.8 4,696,753 - ybdR NOLOHH_23870 0.13 +0.3 4,696,753 - ybdR NOLOHH_23870 0.13 +0.7 4,696,753 - ybdR NOLOHH_23870 0.13 +0.3 4,696,755 - ybdR NOLOHH_23870 0.13 -1.9 4,696,755 - ybdR NOLOHH_23870 0.13 +0.0 4,696,755 - ybdR NOLOHH_23870 0.13 +0.7 4,696,807 + ybdR NOLOHH_23870 0.17 +1.0 4,696,808 - ybdR NOLOHH_23870 0.17 +2.0 4,696,849 - ybdR NOLOHH_23870 0.20 +0.3 4,696,897 - ybdR NOLOHH_23870 0.24 -0.3 4,696,897 - ybdR NOLOHH_23870 0.24 -0.8 4,696,923 + ybdR NOLOHH_23870 0.26 -0.1 4,696,923 + ybdR NOLOHH_23870 0.26 +0.2 4,696,953 + ybdR NOLOHH_23870 0.29 +0.6 4,696,953 + ybdR NOLOHH_23870 0.29 +0.4 4,697,050 + ybdR NOLOHH_23870 0.37 +1.3 4,697,054 - ybdR NOLOHH_23870 0.37 +1.2 4,697,091 + ybdR NOLOHH_23870 0.40 -0.3
Or see this region's nucleotide sequence