Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_22840 and NOLOHH_22845 are separated by 11 nucleotides NOLOHH_22845 and NOLOHH_22850 are separated by 13 nucleotides
NOLOHH_22840: NOLOHH_22840 - head protein, at 4,510,065 to 4,511,336
_22840
NOLOHH_22845: NOLOHH_22845 - phage capsid protein, at 4,511,348 to 4,512,232
_22845
NOLOHH_22850: NOLOHH_22850 - portal protein, at 4,512,246 to 4,514,336
_22850
Position (kb)
4511
4512
4513 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4510.351 kb on - strand, within NOLOHH_22840 at 4510.351 kb on - strand, within NOLOHH_22840 at 4510.361 kb on - strand, within NOLOHH_22840 at 4510.361 kb on - strand, within NOLOHH_22840 at 4510.373 kb on + strand, within NOLOHH_22840 at 4510.374 kb on - strand, within NOLOHH_22840 at 4510.374 kb on - strand, within NOLOHH_22840 at 4510.374 kb on - strand, within NOLOHH_22840 at 4510.381 kb on + strand, within NOLOHH_22840 at 4510.445 kb on + strand, within NOLOHH_22840 at 4510.464 kb on - strand, within NOLOHH_22840 at 4510.464 kb on - strand, within NOLOHH_22840 at 4510.484 kb on - strand, within NOLOHH_22840 at 4510.516 kb on + strand, within NOLOHH_22840 at 4510.517 kb on - strand, within NOLOHH_22840 at 4510.521 kb on - strand, within NOLOHH_22840 at 4510.521 kb on - strand, within NOLOHH_22840 at 4510.521 kb on - strand, within NOLOHH_22840 at 4510.590 kb on + strand, within NOLOHH_22840 at 4510.591 kb on - strand, within NOLOHH_22840 at 4510.591 kb on - strand, within NOLOHH_22840 at 4510.604 kb on - strand, within NOLOHH_22840 at 4510.604 kb on - strand, within NOLOHH_22840 at 4510.624 kb on + strand, within NOLOHH_22840 at 4510.624 kb on + strand, within NOLOHH_22840 at 4510.624 kb on + strand, within NOLOHH_22840 at 4510.625 kb on - strand, within NOLOHH_22840 at 4510.625 kb on - strand, within NOLOHH_22840 at 4510.758 kb on - strand, within NOLOHH_22840 at 4511.080 kb on + strand, within NOLOHH_22840 at 4511.080 kb on + strand, within NOLOHH_22840 at 4511.080 kb on + strand, within NOLOHH_22840 at 4511.080 kb on + strand, within NOLOHH_22840 at 4511.081 kb on - strand, within NOLOHH_22840 at 4511.081 kb on - strand, within NOLOHH_22840 at 4511.081 kb on - strand, within NOLOHH_22840 at 4511.081 kb on - strand, within NOLOHH_22840 at 4511.081 kb on - strand, within NOLOHH_22840 at 4511.084 kb on + strand, within NOLOHH_22840 at 4511.085 kb on - strand, within NOLOHH_22840 at 4511.088 kb on + strand, within NOLOHH_22840 at 4511.089 kb on - strand, within NOLOHH_22840 at 4511.142 kb on - strand, within NOLOHH_22840 at 4511.142 kb on - strand, within NOLOHH_22840 at 4511.263 kb on - strand at 4511.339 kb on - strand at 4511.466 kb on - strand, within NOLOHH_22845 at 4511.466 kb on - strand, within NOLOHH_22845 at 4511.466 kb on - strand, within NOLOHH_22845 at 4511.552 kb on - strand, within NOLOHH_22845 at 4511.555 kb on + strand, within NOLOHH_22845 at 4511.570 kb on + strand, within NOLOHH_22845 at 4511.571 kb on - strand, within NOLOHH_22845 at 4511.571 kb on - strand, within NOLOHH_22845 at 4511.571 kb on - strand, within NOLOHH_22845 at 4511.703 kb on - strand, within NOLOHH_22845 at 4511.728 kb on - strand, within NOLOHH_22845 at 4512.258 kb on + strand at 4512.312 kb on + strand at 4512.334 kb on - strand at 4512.383 kb on - strand at 4512.426 kb on - strand at 4512.426 kb on - strand at 4512.659 kb on + strand, within NOLOHH_22850 at 4512.660 kb on - strand, within NOLOHH_22850 at 4512.820 kb on - strand, within NOLOHH_22850 at 4512.951 kb on + strand, within NOLOHH_22850 at 4512.952 kb on - strand, within NOLOHH_22850 at 4513.011 kb on - strand, within NOLOHH_22850 at 4513.055 kb on + strand, within NOLOHH_22850 at 4513.056 kb on - strand, within NOLOHH_22850 at 4513.122 kb on + strand, within NOLOHH_22850 at 4513.123 kb on - strand, within NOLOHH_22850 at 4513.125 kb on + strand, within NOLOHH_22850 at 4513.125 kb on + strand, within NOLOHH_22850 at 4513.163 kb on + strand, within NOLOHH_22850 at 4513.164 kb on - strand, within NOLOHH_22850 at 4513.164 kb on - strand, within NOLOHH_22850 at 4513.166 kb on - strand, within NOLOHH_22850 at 4513.205 kb on + strand, within NOLOHH_22850
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 4,510,351 - NOLOHH_22840 0.22 +0.6 4,510,351 - NOLOHH_22840 0.22 +1.3 4,510,361 - NOLOHH_22840 0.23 -1.3 4,510,361 - NOLOHH_22840 0.23 -0.6 4,510,373 + NOLOHH_22840 0.24 -0.7 4,510,374 - NOLOHH_22840 0.24 -1.1 4,510,374 - NOLOHH_22840 0.24 -0.6 4,510,374 - NOLOHH_22840 0.24 -0.3 4,510,381 + NOLOHH_22840 0.25 +0.2 4,510,445 + NOLOHH_22840 0.30 +1.4 4,510,464 - NOLOHH_22840 0.31 -0.3 4,510,464 - NOLOHH_22840 0.31 +1.4 4,510,484 - NOLOHH_22840 0.33 -1.4 4,510,516 + NOLOHH_22840 0.35 +0.4 4,510,517 - NOLOHH_22840 0.36 -1.6 4,510,521 - NOLOHH_22840 0.36 +0.2 4,510,521 - NOLOHH_22840 0.36 -0.6 4,510,521 - NOLOHH_22840 0.36 -0.2 4,510,590 + NOLOHH_22840 0.41 -2.1 4,510,591 - NOLOHH_22840 0.41 +0.6 4,510,591 - NOLOHH_22840 0.41 -0.0 4,510,604 - NOLOHH_22840 0.42 -1.4 4,510,604 - NOLOHH_22840 0.42 -0.9 4,510,624 + NOLOHH_22840 0.44 +0.4 4,510,624 + NOLOHH_22840 0.44 -0.3 4,510,624 + NOLOHH_22840 0.44 +1.0 4,510,625 - NOLOHH_22840 0.44 -0.3 4,510,625 - NOLOHH_22840 0.44 +0.2 4,510,758 - NOLOHH_22840 0.54 -0.1 4,511,080 + NOLOHH_22840 0.80 +0.4 4,511,080 + NOLOHH_22840 0.80 +0.9 4,511,080 + NOLOHH_22840 0.80 +1.0 4,511,080 + NOLOHH_22840 0.80 -0.9 4,511,081 - NOLOHH_22840 0.80 +0.4 4,511,081 - NOLOHH_22840 0.80 +1.3 4,511,081 - NOLOHH_22840 0.80 +0.4 4,511,081 - NOLOHH_22840 0.80 +0.1 4,511,081 - NOLOHH_22840 0.80 -1.7 4,511,084 + NOLOHH_22840 0.80 -1.6 4,511,085 - NOLOHH_22840 0.80 -0.8 4,511,088 + NOLOHH_22840 0.80 -1.3 4,511,089 - NOLOHH_22840 0.81 +2.0 4,511,142 - NOLOHH_22840 0.85 +0.0 4,511,142 - NOLOHH_22840 0.85 -1.6 4,511,263 - +2.3 4,511,339 - -0.3 4,511,466 - NOLOHH_22845 0.13 -1.1 4,511,466 - NOLOHH_22845 0.13 +1.4 4,511,466 - NOLOHH_22845 0.13 -1.1 4,511,552 - NOLOHH_22845 0.23 -0.6 4,511,555 + NOLOHH_22845 0.23 +2.0 4,511,570 + NOLOHH_22845 0.25 -1.1 4,511,571 - NOLOHH_22845 0.25 -0.3 4,511,571 - NOLOHH_22845 0.25 +0.1 4,511,571 - NOLOHH_22845 0.25 -1.6 4,511,703 - NOLOHH_22845 0.40 +1.0 4,511,728 - NOLOHH_22845 0.43 -0.1 4,512,258 + +1.0 4,512,312 + +2.0 4,512,334 - +1.4 4,512,383 - +2.0 4,512,426 - -2.0 4,512,426 - +0.4 4,512,659 + NOLOHH_22850 0.20 -0.8 4,512,660 - NOLOHH_22850 0.20 -1.1 4,512,820 - NOLOHH_22850 0.27 -0.6 4,512,951 + NOLOHH_22850 0.34 -1.1 4,512,952 - NOLOHH_22850 0.34 -1.6 4,513,011 - NOLOHH_22850 0.37 -0.1 4,513,055 + NOLOHH_22850 0.39 +0.4 4,513,056 - NOLOHH_22850 0.39 -1.7 4,513,122 + NOLOHH_22850 0.42 -1.9 4,513,123 - NOLOHH_22850 0.42 -2.1 4,513,125 + NOLOHH_22850 0.42 +0.1 4,513,125 + NOLOHH_22850 0.42 -1.1 4,513,163 + NOLOHH_22850 0.44 -0.6 4,513,164 - NOLOHH_22850 0.44 -2.1 4,513,164 - NOLOHH_22850 0.44 -1.1 4,513,166 - NOLOHH_22850 0.44 -2.1 4,513,205 + NOLOHH_22850 0.46 +0.7
Or see this region's nucleotide sequence