Strain Fitness in Escherichia coli ECOR27 around NOLOHH_18700

Experiment: Bas67

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntNOLOHH_18695 and lacF are separated by 27 nucleotideslacF and NOLOHH_18705 are separated by 55 nucleotides NOLOHH_18695: NOLOHH_18695 - PTS cellobiose transporter subunit IIC, at 3,659,463 to 3,660,785 _18695 NOLOHH_18700: lacF - PTS lactose/cellobiose transporter subunit IIA, at 3,660,813 to 3,661,124 lacF NOLOHH_18705: NOLOHH_18705 - cryptic outer membrane porin BglH, at 3,661,180 to 3,662,853 _18705 Position (kb) 3660 3661 3662Strain fitness (log2 ratio) -2 -1 0 1at 3661.595 kb on + strand, within NOLOHH_18705at 3661.813 kb on + strand, within NOLOHH_18705

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas67
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3,661,595 + NOLOHH_18705 0.25 -2.1
3,661,813 + NOLOHH_18705 0.38 +0.3

Or see this region's nucleotide sequence