Strain Fitness in Escherichia coli ECOR27 around NOLOHH_18690

Experiment: Bas67

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nteamA and NOLOHH_18685 are separated by 44 nucleotidesNOLOHH_18685 and NOLOHH_18690 are separated by 198 nucleotidesNOLOHH_18690 and NOLOHH_18695 are separated by 114 nucleotides NOLOHH_18680: eamA - O-acetylserine/cysteine exporter, at 3,657,196 to 3,658,095 eamA NOLOHH_18685: NOLOHH_18685 - GntR family transcriptional regulator, at 3,658,140 to 3,658,838 _18685 NOLOHH_18690: NOLOHH_18690 - PTS sugar transporter subunit IIB, at 3,659,037 to 3,659,348 _18690 NOLOHH_18695: NOLOHH_18695 - PTS cellobiose transporter subunit IIC, at 3,659,463 to 3,660,785 _18695 Position (kb) 3659 3660Strain fitness (log2 ratio) -1 0 1at 3658.042 kb on + strandat 3658.052 kb on + strandat 3658.052 kb on + strandat 3658.649 kb on - strand, within NOLOHH_18685at 3658.975 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas67
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3,658,042 + -0.7
3,658,052 + +0.3
3,658,052 + -0.1
3,658,649 - NOLOHH_18685 0.73 -1.1
3,658,975 - -1.3

Or see this region's nucleotide sequence