Strain Fitness in Escherichia coli ECOR27 around NOLOHH_17070

Experiment: Bas67

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas67
3,350,769	+	pdeD	NOLOHH_17065	0.53	+0.2
3,350,803	+	pdeD	NOLOHH_17065	0.55	-0.3
3,351,009	+	pdeD	NOLOHH_17065	0.68	+1.2
3,351,047	+	pdeD	NOLOHH_17065	0.70	+0.2
3,351,047	+	pdeD	NOLOHH_17065	0.70	+1.2
3,351,264	+	pdeD	NOLOHH_17065	0.84	-1.6
3,351,360	+	pdeD	NOLOHH_17065	0.90	+1.2
3,351,400	-				-0.0
3,351,490	+				-0.3
3,351,490	+				-0.8
3,351,576	+				-1.3
3,351,577	-				+0.8
3,351,586	+				-0.4
3,351,589	+				-0.8
3,351,612	+				-1.4
3,351,651	-				-1.1
3,351,651	-				+1.8
3,352,024	-	sdaA	NOLOHH_17070	0.27	+0.2
3,352,024	-	sdaA	NOLOHH_17070	0.27	+1.6
3,352,041	-	sdaA	NOLOHH_17070	0.28	+1.4
3,352,069	-	sdaA	NOLOHH_17070	0.31	+1.2
3,352,083	-	sdaA	NOLOHH_17070	0.32	+0.0
3,352,083	-	sdaA	NOLOHH_17070	0.32	+0.8
3,352,119	-	sdaA	NOLOHH_17070	0.34	-1.6
3,352,119	-	sdaA	NOLOHH_17070	0.34	+0.1
3,352,277	-	sdaA	NOLOHH_17070	0.46	+0.5
3,352,360	-	sdaA	NOLOHH_17070	0.52	+0.2
3,352,395	-	sdaA	NOLOHH_17070	0.54	+0.2
3,352,479	-	sdaA	NOLOHH_17070	0.61	-2.4
3,352,567	-	sdaA	NOLOHH_17070	0.67	+1.8
3,353,063	-				+0.2
3,353,073	-				+0.2
3,353,078	-				+0.6
3,353,078	-				+1.2
3,353,102	-				-1.4
3,353,185	+				+0.2
3,353,186	-				+1.2
3,353,195	+				+0.2
3,353,196	-				-0.2
3,353,324	-	nudL	NOLOHH_17075	0.21	+0.2
3,353,348	-	nudL	NOLOHH_17075	0.26	-2.1
3,353,348	-	nudL	NOLOHH_17075	0.26	+1.2
3,353,698	+	nudL	NOLOHH_17075	0.86	+0.5
3,353,783	+				-1.8
3,353,784	-				-0.4
3,353,801	-				+0.8
3,353,812	-				-0.8
3,353,835	-				-1.2
3,353,885	+				-0.5
3,353,888	-				+0.2
3,353,888	-				-1.4
3,353,888	-				+1.2
3,353,888	-				-1.0
3,353,888	-				-0.5
3,353,888	-				-2.1
3,353,923	-	pabB	NOLOHH_17080	0.10	-0.1
3,353,958	-	pabB	NOLOHH_17080	0.13	-0.4
3,353,983	-	pabB	NOLOHH_17080	0.15	-0.2