Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt nuoM and nuoN are separated by 6 nucleotides nuoN and yfbM are separated by 66 nucleotides
NOLOHH_14515: nuoM - NADH-quinone oxidoreductase subunit M, at 2,828,963 to 2,830,492
nuoM
NOLOHH_14520: nuoN - NADH-quinone oxidoreductase subunit NuoN, at 2,830,499 to 2,831,956
nuoN
NOLOHH_14525: yfbM - Protein YfbM, at 2,832,023 to 2,832,526
yfbM
Position (kb)
2830
2831
2832 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2829.551 kb on + strand, within nuoM at 2829.552 kb on - strand, within nuoM at 2829.552 kb on - strand, within nuoM at 2829.624 kb on - strand, within nuoM at 2829.832 kb on + strand, within nuoM at 2829.832 kb on + strand, within nuoM at 2829.833 kb on - strand, within nuoM at 2829.833 kb on - strand, within nuoM at 2829.860 kb on + strand, within nuoM at 2829.912 kb on - strand, within nuoM at 2829.950 kb on - strand, within nuoM at 2830.030 kb on + strand, within nuoM at 2830.186 kb on + strand, within nuoM at 2830.186 kb on + strand, within nuoM at 2830.361 kb on - strand at 2830.403 kb on + strand at 2830.465 kb on + strand at 2830.477 kb on + strand at 2830.478 kb on - strand at 2830.478 kb on - strand at 2830.480 kb on + strand at 2830.480 kb on + strand at 2830.480 kb on + strand at 2830.481 kb on - strand at 2830.490 kb on + strand at 2830.724 kb on + strand, within nuoN at 2830.724 kb on + strand, within nuoN at 2830.815 kb on - strand, within nuoN at 2830.827 kb on + strand, within nuoN at 2830.827 kb on + strand, within nuoN at 2830.973 kb on + strand, within nuoN at 2831.030 kb on + strand, within nuoN at 2831.030 kb on + strand, within nuoN at 2831.031 kb on - strand, within nuoN at 2831.087 kb on - strand, within nuoN at 2831.187 kb on + strand, within nuoN at 2831.187 kb on + strand, within nuoN at 2831.313 kb on + strand, within nuoN at 2831.313 kb on + strand, within nuoN at 2831.314 kb on - strand, within nuoN at 2831.404 kb on + strand, within nuoN at 2831.484 kb on - strand, within nuoN at 2831.687 kb on + strand, within nuoN at 2831.688 kb on - strand, within nuoN at 2831.768 kb on + strand, within nuoN at 2831.795 kb on + strand, within nuoN at 2831.846 kb on + strand at 2831.846 kb on + strand at 2831.889 kb on + strand at 2831.954 kb on + strand at 2831.954 kb on + strand at 2831.954 kb on + strand at 2831.954 kb on + strand at 2831.954 kb on + strand at 2831.955 kb on - strand at 2831.955 kb on - strand at 2831.955 kb on - strand at 2831.955 kb on - strand at 2831.955 kb on - strand at 2831.955 kb on - strand at 2831.959 kb on + strand at 2831.959 kb on + strand at 2831.959 kb on + strand at 2832.068 kb on - strand at 2832.068 kb on - strand at 2832.068 kb on - strand at 2832.200 kb on - strand, within yfbM at 2832.249 kb on - strand, within yfbM at 2832.285 kb on - strand, within yfbM at 2832.285 kb on - strand, within yfbM at 2832.285 kb on - strand, within yfbM at 2832.285 kb on - strand, within yfbM at 2832.437 kb on + strand, within yfbM at 2832.438 kb on - strand, within yfbM at 2832.438 kb on - strand, within yfbM at 2832.440 kb on - strand, within yfbM at 2832.511 kb on - strand at 2832.590 kb on - strand at 2832.700 kb on - strand at 2832.726 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 2,829,551 + nuoM NOLOHH_14515 0.38 +2.0 2,829,552 - nuoM NOLOHH_14515 0.38 -0.6 2,829,552 - nuoM NOLOHH_14515 0.38 -0.2 2,829,624 - nuoM NOLOHH_14515 0.43 -0.6 2,829,832 + nuoM NOLOHH_14515 0.57 -2.2 2,829,832 + nuoM NOLOHH_14515 0.57 -1.2 2,829,833 - nuoM NOLOHH_14515 0.57 +1.4 2,829,833 - nuoM NOLOHH_14515 0.57 -1.2 2,829,860 + nuoM NOLOHH_14515 0.59 -1.6 2,829,912 - nuoM NOLOHH_14515 0.62 -1.2 2,829,950 - nuoM NOLOHH_14515 0.65 -1.2 2,830,030 + nuoM NOLOHH_14515 0.70 -0.0 2,830,186 + nuoM NOLOHH_14515 0.80 +1.4 2,830,186 + nuoM NOLOHH_14515 0.80 -0.6 2,830,361 - -0.6 2,830,403 + -1.2 2,830,465 + -0.2 2,830,477 + -1.4 2,830,478 - -0.2 2,830,478 - -0.6 2,830,480 + -1.0 2,830,480 + -0.6 2,830,480 + -0.4 2,830,481 - -1.0 2,830,490 + -2.4 2,830,724 + nuoN NOLOHH_14520 0.15 -0.6 2,830,724 + nuoN NOLOHH_14520 0.15 +0.9 2,830,815 - nuoN NOLOHH_14520 0.22 -1.0 2,830,827 + nuoN NOLOHH_14520 0.22 -0.6 2,830,827 + nuoN NOLOHH_14520 0.22 +0.4 2,830,973 + nuoN NOLOHH_14520 0.33 +0.4 2,831,030 + nuoN NOLOHH_14520 0.36 -0.6 2,831,030 + nuoN NOLOHH_14520 0.36 -0.2 2,831,031 - nuoN NOLOHH_14520 0.36 +0.4 2,831,087 - nuoN NOLOHH_14520 0.40 +0.4 2,831,187 + nuoN NOLOHH_14520 0.47 -1.2 2,831,187 + nuoN NOLOHH_14520 0.47 -1.2 2,831,313 + nuoN NOLOHH_14520 0.56 +0.4 2,831,313 + nuoN NOLOHH_14520 0.56 +1.4 2,831,314 - nuoN NOLOHH_14520 0.56 +0.4 2,831,404 + nuoN NOLOHH_14520 0.62 +0.7 2,831,484 - nuoN NOLOHH_14520 0.68 -2.0 2,831,687 + nuoN NOLOHH_14520 0.81 -0.6 2,831,688 - nuoN NOLOHH_14520 0.82 -1.6 2,831,768 + nuoN NOLOHH_14520 0.87 +0.4 2,831,795 + nuoN NOLOHH_14520 0.89 +0.4 2,831,846 + +0.4 2,831,846 + -0.2 2,831,889 + +0.4 2,831,954 + -0.3 2,831,954 + +0.4 2,831,954 + +0.4 2,831,954 + +0.1 2,831,954 + -0.1 2,831,955 - +1.4 2,831,955 - +1.4 2,831,955 - -2.2 2,831,955 - -0.2 2,831,955 - +1.4 2,831,955 - +0.4 2,831,959 + -1.6 2,831,959 + +0.7 2,831,959 + -0.6 2,832,068 - -0.3 2,832,068 - -0.6 2,832,068 - -0.8 2,832,200 - yfbM NOLOHH_14525 0.35 -1.3 2,832,249 - yfbM NOLOHH_14525 0.45 +1.1 2,832,285 - yfbM NOLOHH_14525 0.52 +1.4 2,832,285 - yfbM NOLOHH_14525 0.52 -0.5 2,832,285 - yfbM NOLOHH_14525 0.52 -0.2 2,832,285 - yfbM NOLOHH_14525 0.52 +0.1 2,832,437 + yfbM NOLOHH_14525 0.82 -1.6 2,832,438 - yfbM NOLOHH_14525 0.82 -1.0 2,832,438 - yfbM NOLOHH_14525 0.82 +0.4 2,832,440 - yfbM NOLOHH_14525 0.83 +0.9 2,832,511 - -0.4 2,832,590 - +0.2 2,832,700 - +0.9 2,832,726 + -2.0
Or see this region's nucleotide sequence