Strain Fitness in Escherichia coli ECOR27 around NOLOHH_14520

Experiment: Bas67

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntnuoM and nuoN are separated by 6 nucleotidesnuoN and yfbM are separated by 66 nucleotides NOLOHH_14515: nuoM - NADH-quinone oxidoreductase subunit M, at 2,828,963 to 2,830,492 nuoM NOLOHH_14520: nuoN - NADH-quinone oxidoreductase subunit NuoN, at 2,830,499 to 2,831,956 nuoN NOLOHH_14525: yfbM - Protein YfbM, at 2,832,023 to 2,832,526 yfbM Position (kb) 2830 2831 2832Strain fitness (log2 ratio) -2 -1 0 1 2at 2829.551 kb on + strand, within nuoMat 2829.552 kb on - strand, within nuoMat 2829.552 kb on - strand, within nuoMat 2829.624 kb on - strand, within nuoMat 2829.832 kb on + strand, within nuoMat 2829.832 kb on + strand, within nuoMat 2829.833 kb on - strand, within nuoMat 2829.833 kb on - strand, within nuoMat 2829.860 kb on + strand, within nuoMat 2829.912 kb on - strand, within nuoMat 2829.950 kb on - strand, within nuoMat 2830.030 kb on + strand, within nuoMat 2830.186 kb on + strand, within nuoMat 2830.186 kb on + strand, within nuoMat 2830.361 kb on - strandat 2830.403 kb on + strandat 2830.465 kb on + strandat 2830.477 kb on + strandat 2830.478 kb on - strandat 2830.478 kb on - strandat 2830.480 kb on + strandat 2830.480 kb on + strandat 2830.480 kb on + strandat 2830.481 kb on - strandat 2830.490 kb on + strandat 2830.724 kb on + strand, within nuoNat 2830.724 kb on + strand, within nuoNat 2830.815 kb on - strand, within nuoNat 2830.827 kb on + strand, within nuoNat 2830.827 kb on + strand, within nuoNat 2830.973 kb on + strand, within nuoNat 2831.030 kb on + strand, within nuoNat 2831.030 kb on + strand, within nuoNat 2831.031 kb on - strand, within nuoNat 2831.087 kb on - strand, within nuoNat 2831.187 kb on + strand, within nuoNat 2831.187 kb on + strand, within nuoNat 2831.313 kb on + strand, within nuoNat 2831.313 kb on + strand, within nuoNat 2831.314 kb on - strand, within nuoNat 2831.404 kb on + strand, within nuoNat 2831.484 kb on - strand, within nuoNat 2831.687 kb on + strand, within nuoNat 2831.688 kb on - strand, within nuoNat 2831.768 kb on + strand, within nuoNat 2831.795 kb on + strand, within nuoNat 2831.846 kb on + strandat 2831.846 kb on + strandat 2831.889 kb on + strandat 2831.954 kb on + strandat 2831.954 kb on + strandat 2831.954 kb on + strandat 2831.954 kb on + strandat 2831.954 kb on + strandat 2831.955 kb on - strandat 2831.955 kb on - strandat 2831.955 kb on - strandat 2831.955 kb on - strandat 2831.955 kb on - strandat 2831.955 kb on - strandat 2831.959 kb on + strandat 2831.959 kb on + strandat 2831.959 kb on + strandat 2832.068 kb on - strandat 2832.068 kb on - strandat 2832.068 kb on - strandat 2832.200 kb on - strand, within yfbMat 2832.249 kb on - strand, within yfbMat 2832.285 kb on - strand, within yfbMat 2832.285 kb on - strand, within yfbMat 2832.285 kb on - strand, within yfbMat 2832.285 kb on - strand, within yfbMat 2832.437 kb on + strand, within yfbMat 2832.438 kb on - strand, within yfbMat 2832.438 kb on - strand, within yfbMat 2832.440 kb on - strand, within yfbMat 2832.511 kb on - strandat 2832.590 kb on - strandat 2832.700 kb on - strandat 2832.726 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas67
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2,829,551 + nuoM NOLOHH_14515 0.38 +2.0
2,829,552 - nuoM NOLOHH_14515 0.38 -0.6
2,829,552 - nuoM NOLOHH_14515 0.38 -0.2
2,829,624 - nuoM NOLOHH_14515 0.43 -0.6
2,829,832 + nuoM NOLOHH_14515 0.57 -2.2
2,829,832 + nuoM NOLOHH_14515 0.57 -1.2
2,829,833 - nuoM NOLOHH_14515 0.57 +1.4
2,829,833 - nuoM NOLOHH_14515 0.57 -1.2
2,829,860 + nuoM NOLOHH_14515 0.59 -1.6
2,829,912 - nuoM NOLOHH_14515 0.62 -1.2
2,829,950 - nuoM NOLOHH_14515 0.65 -1.2
2,830,030 + nuoM NOLOHH_14515 0.70 -0.0
2,830,186 + nuoM NOLOHH_14515 0.80 +1.4
2,830,186 + nuoM NOLOHH_14515 0.80 -0.6
2,830,361 - -0.6
2,830,403 + -1.2
2,830,465 + -0.2
2,830,477 + -1.4
2,830,478 - -0.2
2,830,478 - -0.6
2,830,480 + -1.0
2,830,480 + -0.6
2,830,480 + -0.4
2,830,481 - -1.0
2,830,490 + -2.4
2,830,724 + nuoN NOLOHH_14520 0.15 -0.6
2,830,724 + nuoN NOLOHH_14520 0.15 +0.9
2,830,815 - nuoN NOLOHH_14520 0.22 -1.0
2,830,827 + nuoN NOLOHH_14520 0.22 -0.6
2,830,827 + nuoN NOLOHH_14520 0.22 +0.4
2,830,973 + nuoN NOLOHH_14520 0.33 +0.4
2,831,030 + nuoN NOLOHH_14520 0.36 -0.6
2,831,030 + nuoN NOLOHH_14520 0.36 -0.2
2,831,031 - nuoN NOLOHH_14520 0.36 +0.4
2,831,087 - nuoN NOLOHH_14520 0.40 +0.4
2,831,187 + nuoN NOLOHH_14520 0.47 -1.2
2,831,187 + nuoN NOLOHH_14520 0.47 -1.2
2,831,313 + nuoN NOLOHH_14520 0.56 +0.4
2,831,313 + nuoN NOLOHH_14520 0.56 +1.4
2,831,314 - nuoN NOLOHH_14520 0.56 +0.4
2,831,404 + nuoN NOLOHH_14520 0.62 +0.7
2,831,484 - nuoN NOLOHH_14520 0.68 -2.0
2,831,687 + nuoN NOLOHH_14520 0.81 -0.6
2,831,688 - nuoN NOLOHH_14520 0.82 -1.6
2,831,768 + nuoN NOLOHH_14520 0.87 +0.4
2,831,795 + nuoN NOLOHH_14520 0.89 +0.4
2,831,846 + +0.4
2,831,846 + -0.2
2,831,889 + +0.4
2,831,954 + -0.3
2,831,954 + +0.4
2,831,954 + +0.4
2,831,954 + +0.1
2,831,954 + -0.1
2,831,955 - +1.4
2,831,955 - +1.4
2,831,955 - -2.2
2,831,955 - -0.2
2,831,955 - +1.4
2,831,955 - +0.4
2,831,959 + -1.6
2,831,959 + +0.7
2,831,959 + -0.6
2,832,068 - -0.3
2,832,068 - -0.6
2,832,068 - -0.8
2,832,200 - yfbM NOLOHH_14525 0.35 -1.3
2,832,249 - yfbM NOLOHH_14525 0.45 +1.1
2,832,285 - yfbM NOLOHH_14525 0.52 +1.4
2,832,285 - yfbM NOLOHH_14525 0.52 -0.5
2,832,285 - yfbM NOLOHH_14525 0.52 -0.2
2,832,285 - yfbM NOLOHH_14525 0.52 +0.1
2,832,437 + yfbM NOLOHH_14525 0.82 -1.6
2,832,438 - yfbM NOLOHH_14525 0.82 -1.0
2,832,438 - yfbM NOLOHH_14525 0.82 +0.4
2,832,440 - yfbM NOLOHH_14525 0.83 +0.9
2,832,511 - -0.4
2,832,590 - +0.2
2,832,700 - +0.9
2,832,726 + -2.0

Or see this region's nucleotide sequence