Strain Fitness in Escherichia coli ECOR27 around NOLOHH_13705

Experiment: Bas67

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nteutP and eutQ overlap by 26 nucleotideseutQ and eutT overlap by 4 nucleotideseutT and pta overlap by 4 nucleotides NOLOHH_13695: eutP - ethanolamine utilization acetate kinase EutP, at 2,663,280 to 2,663,759 eutP NOLOHH_13700: eutQ - ethanolamine utilization acetate kinase EutQ, at 2,663,734 to 2,664,435 eutQ NOLOHH_13705: eutT - ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT, at 2,664,432 to 2,665,235 eutT NOLOHH_13710: pta - phosphate acetyltransferase, at 2,665,232 to 2,666,248 pta Position (kb) 2664 2665 2666Strain fitness (log2 ratio) -2 -1 0 1at 2663.456 kb on + strand, within eutPat 2663.456 kb on + strand, within eutPat 2663.473 kb on + strand, within eutPat 2663.473 kb on + strand, within eutPat 2663.474 kb on - strand, within eutPat 2663.474 kb on - strand, within eutPat 2663.487 kb on + strand, within eutPat 2663.488 kb on - strand, within eutPat 2663.577 kb on - strand, within eutPat 2663.620 kb on + strand, within eutPat 2663.621 kb on - strand, within eutPat 2663.700 kb on + strand, within eutPat 2663.761 kb on - strandat 2663.821 kb on - strand, within eutQat 2663.852 kb on + strand, within eutQat 2664.217 kb on - strand, within eutQat 2664.257 kb on - strand, within eutQat 2664.375 kb on + strandat 2664.400 kb on + strandat 2664.401 kb on - strandat 2664.460 kb on + strandat 2664.473 kb on + strandat 2664.474 kb on - strandat 2664.474 kb on - strandat 2664.573 kb on - strand, within eutTat 2664.876 kb on - strand, within eutTat 2664.876 kb on - strand, within eutTat 2664.973 kb on - strand, within eutTat 2665.109 kb on - strand, within eutTat 2665.155 kb on + strandat 2665.156 kb on - strandat 2665.328 kb on + strandat 2665.328 kb on + strandat 2665.329 kb on - strandat 2665.329 kb on - strandat 2665.333 kb on - strandat 2665.663 kb on + strand, within ptaat 2665.663 kb on + strand, within ptaat 2665.664 kb on - strand, within ptaat 2665.700 kb on + strand, within ptaat 2665.700 kb on + strand, within ptaat 2665.700 kb on + strand, within ptaat 2665.944 kb on + strand, within ptaat 2665.945 kb on - strand, within ptaat 2665.945 kb on - strand, within ptaat 2666.053 kb on + strand, within ptaat 2666.110 kb on - strand, within ptaat 2666.110 kb on - strand, within ptaat 2666.110 kb on - strand, within ptaat 2666.152 kb on + strandat 2666.152 kb on + strandat 2666.153 kb on - strandat 2666.153 kb on - strandat 2666.153 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas67
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2,663,456 + eutP NOLOHH_13695 0.37 -0.2
2,663,456 + eutP NOLOHH_13695 0.37 +1.1
2,663,473 + eutP NOLOHH_13695 0.40 +0.1
2,663,473 + eutP NOLOHH_13695 0.40 -0.5
2,663,474 - eutP NOLOHH_13695 0.40 -0.5
2,663,474 - eutP NOLOHH_13695 0.40 -0.7
2,663,487 + eutP NOLOHH_13695 0.43 -1.4
2,663,488 - eutP NOLOHH_13695 0.43 -1.3
2,663,577 - eutP NOLOHH_13695 0.62 -0.3
2,663,620 + eutP NOLOHH_13695 0.71 +0.3
2,663,621 - eutP NOLOHH_13695 0.71 +0.3
2,663,700 + eutP NOLOHH_13695 0.88 -0.5
2,663,761 - -0.7
2,663,821 - eutQ NOLOHH_13700 0.12 +0.9
2,663,852 + eutQ NOLOHH_13700 0.17 +1.2
2,664,217 - eutQ NOLOHH_13700 0.69 +0.3
2,664,257 - eutQ NOLOHH_13700 0.75 -0.7
2,664,375 + +0.3
2,664,400 + +0.5
2,664,401 - +0.0
2,664,460 + -0.5
2,664,473 + -0.8
2,664,474 - +1.1
2,664,474 - +1.7
2,664,573 - eutT NOLOHH_13705 0.18 +1.5
2,664,876 - eutT NOLOHH_13705 0.55 -1.8
2,664,876 - eutT NOLOHH_13705 0.55 -0.3
2,664,973 - eutT NOLOHH_13705 0.67 -0.1
2,665,109 - eutT NOLOHH_13705 0.84 +0.5
2,665,155 + +1.0
2,665,156 - -0.4
2,665,328 + -0.3
2,665,328 + -0.5
2,665,329 - +0.3
2,665,329 - +0.9
2,665,333 - -1.1
2,665,663 + pta NOLOHH_13710 0.42 -0.3
2,665,663 + pta NOLOHH_13710 0.42 -0.8
2,665,664 - pta NOLOHH_13710 0.42 +0.3
2,665,700 + pta NOLOHH_13710 0.46 -0.5
2,665,700 + pta NOLOHH_13710 0.46 +1.2
2,665,700 + pta NOLOHH_13710 0.46 +0.4
2,665,944 + pta NOLOHH_13710 0.70 -0.9
2,665,945 - pta NOLOHH_13710 0.70 -0.7
2,665,945 - pta NOLOHH_13710 0.70 -0.3
2,666,053 + pta NOLOHH_13710 0.81 +1.1
2,666,110 - pta NOLOHH_13710 0.86 +0.3
2,666,110 - pta NOLOHH_13710 0.86 +0.3
2,666,110 - pta NOLOHH_13710 0.86 -1.7
2,666,152 + +0.5
2,666,152 + -0.0
2,666,153 - +1.5
2,666,153 - -1.5
2,666,153 - +0.3

Or see this region's nucleotide sequence