Strain Fitness in Escherichia coli ECOR27 around NOLOHH_13695

Experiment: Bas67

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmaeB and eutS are separated by 292 nucleotideseutS and eutP are separated by 12 nucleotideseutP and eutQ overlap by 26 nucleotideseutQ and eutT overlap by 4 nucleotides NOLOHH_13685: maeB - NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase, at 2,660,360 to 2,662,639 maeB NOLOHH_13690: eutS - Bacterial microcompartment shell protein EutS, at 2,662,932 to 2,663,267 eutS NOLOHH_13695: eutP - ethanolamine utilization acetate kinase EutP, at 2,663,280 to 2,663,759 eutP NOLOHH_13700: eutQ - ethanolamine utilization acetate kinase EutQ, at 2,663,734 to 2,664,435 eutQ NOLOHH_13705: eutT - ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT, at 2,664,432 to 2,665,235 eutT Position (kb) 2663 2664Strain fitness (log2 ratio) -2 -1 0 1 2at 2662.475 kb on - strandat 2662.485 kb on + strandat 2662.649 kb on - strandat 2662.697 kb on + strandat 2662.700 kb on - strandat 2662.700 kb on - strandat 2662.734 kb on - strandat 2662.748 kb on - strandat 2662.750 kb on - strandat 2662.755 kb on - strandat 2662.755 kb on - strandat 2662.775 kb on - strandat 2662.777 kb on - strandat 2662.817 kb on + strandat 2662.818 kb on - strandat 2662.840 kb on - strandat 2662.878 kb on + strandat 2662.878 kb on + strandat 2662.902 kb on + strandat 2663.068 kb on + strand, within eutSat 2663.189 kb on - strand, within eutSat 2663.222 kb on - strand, within eutSat 2663.265 kb on + strandat 2663.268 kb on + strandat 2663.352 kb on + strand, within eutPat 2663.456 kb on + strand, within eutPat 2663.456 kb on + strand, within eutPat 2663.473 kb on + strand, within eutPat 2663.473 kb on + strand, within eutPat 2663.474 kb on - strand, within eutPat 2663.474 kb on - strand, within eutPat 2663.487 kb on + strand, within eutPat 2663.488 kb on - strand, within eutPat 2663.577 kb on - strand, within eutPat 2663.620 kb on + strand, within eutPat 2663.621 kb on - strand, within eutPat 2663.700 kb on + strand, within eutPat 2663.761 kb on - strandat 2663.821 kb on - strand, within eutQat 2663.852 kb on + strand, within eutQat 2664.217 kb on - strand, within eutQat 2664.257 kb on - strand, within eutQat 2664.375 kb on + strandat 2664.400 kb on + strandat 2664.401 kb on - strandat 2664.460 kb on + strandat 2664.473 kb on + strandat 2664.474 kb on - strandat 2664.474 kb on - strandat 2664.573 kb on - strand, within eutT

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas67
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2,662,475 - +0.8
2,662,485 + -0.5
2,662,649 - +0.3
2,662,697 + +0.8
2,662,700 - -1.7
2,662,700 - +0.0
2,662,734 - +1.5
2,662,748 - +0.9
2,662,750 - +0.3
2,662,755 - -0.5
2,662,755 - +2.3
2,662,775 - -0.3
2,662,777 - +0.3
2,662,817 + -0.3
2,662,818 - -2.3
2,662,840 - -0.7
2,662,878 + +0.3
2,662,878 + +0.8
2,662,902 + +0.6
2,663,068 + eutS NOLOHH_13690 0.40 -0.1
2,663,189 - eutS NOLOHH_13690 0.76 +0.9
2,663,222 - eutS NOLOHH_13690 0.86 +0.0
2,663,265 + -0.7
2,663,268 + +0.3
2,663,352 + eutP NOLOHH_13695 0.15 +1.3
2,663,456 + eutP NOLOHH_13695 0.37 -0.2
2,663,456 + eutP NOLOHH_13695 0.37 +1.1
2,663,473 + eutP NOLOHH_13695 0.40 +0.1
2,663,473 + eutP NOLOHH_13695 0.40 -0.5
2,663,474 - eutP NOLOHH_13695 0.40 -0.5
2,663,474 - eutP NOLOHH_13695 0.40 -0.7
2,663,487 + eutP NOLOHH_13695 0.43 -1.4
2,663,488 - eutP NOLOHH_13695 0.43 -1.3
2,663,577 - eutP NOLOHH_13695 0.62 -0.3
2,663,620 + eutP NOLOHH_13695 0.71 +0.3
2,663,621 - eutP NOLOHH_13695 0.71 +0.3
2,663,700 + eutP NOLOHH_13695 0.88 -0.5
2,663,761 - -0.7
2,663,821 - eutQ NOLOHH_13700 0.12 +0.9
2,663,852 + eutQ NOLOHH_13700 0.17 +1.2
2,664,217 - eutQ NOLOHH_13700 0.69 +0.3
2,664,257 - eutQ NOLOHH_13700 0.75 -0.7
2,664,375 + +0.3
2,664,400 + +0.5
2,664,401 - +0.0
2,664,460 + -0.5
2,664,473 + -0.8
2,664,474 - +1.1
2,664,474 - +1.7
2,664,573 - eutT NOLOHH_13705 0.18 +1.5

Or see this region's nucleotide sequence