Strain Fitness in Escherichia coli ECOR27 around NOLOHH_09610

Experiment: Bas67

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntdegQ and zapG are separated by 153 nucleotideszapG and zapE are separated by 193 nucleotides NOLOHH_09605: degQ - serine endoprotease DegQ, at 1,850,449 to 1,851,816 degQ NOLOHH_09610: zapG - Z-ring associated protein ZapG, at 1,851,970 to 1,852,368 zapG NOLOHH_09615: zapE - cell division protein ZapE, at 1,852,562 to 1,853,689 zapE Position (kb) 1851 1852 1853Strain fitness (log2 ratio) -2 -1 0 1 2at 1851.069 kb on + strand, within degQat 1851.070 kb on - strand, within degQat 1851.072 kb on + strand, within degQat 1851.142 kb on + strand, within degQat 1851.142 kb on + strand, within degQat 1851.143 kb on - strand, within degQat 1851.143 kb on - strand, within degQat 1851.160 kb on + strand, within degQat 1851.160 kb on + strand, within degQat 1851.161 kb on - strand, within degQat 1851.161 kb on - strand, within degQat 1851.163 kb on + strand, within degQat 1851.250 kb on + strand, within degQat 1851.462 kb on + strand, within degQat 1851.484 kb on - strand, within degQat 1851.510 kb on - strand, within degQat 1851.544 kb on + strand, within degQat 1851.545 kb on - strand, within degQat 1851.649 kb on + strand, within degQat 1851.778 kb on + strandat 1851.832 kb on - strandat 1851.843 kb on - strandat 1851.911 kb on - strandat 1851.966 kb on + strandat 1851.991 kb on - strandat 1852.184 kb on - strand, within zapGat 1852.246 kb on - strand, within zapGat 1852.262 kb on + strand, within zapGat 1852.262 kb on + strand, within zapGat 1852.285 kb on + strand, within zapGat 1852.286 kb on - strand, within zapGat 1852.290 kb on + strand, within zapGat 1852.291 kb on - strand, within zapGat 1852.296 kb on + strand, within zapGat 1852.356 kb on - strandat 1852.356 kb on - strandat 1852.356 kb on - strandat 1852.442 kb on + strandat 1852.442 kb on + strandat 1852.443 kb on - strandat 1852.493 kb on + strandat 1852.549 kb on + strandat 1852.663 kb on + strandat 1852.668 kb on - strandat 1852.684 kb on + strand, within zapEat 1852.685 kb on - strand, within zapEat 1852.765 kb on + strand, within zapEat 1852.765 kb on + strand, within zapEat 1852.766 kb on - strand, within zapEat 1852.766 kb on - strand, within zapEat 1852.782 kb on + strand, within zapEat 1852.782 kb on + strand, within zapEat 1852.782 kb on + strand, within zapEat 1852.783 kb on - strand, within zapEat 1852.783 kb on - strand, within zapEat 1852.783 kb on - strand, within zapEat 1852.783 kb on - strand, within zapEat 1852.783 kb on - strand, within zapEat 1852.783 kb on - strand, within zapEat 1852.783 kb on - strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.784 kb on + strand, within zapEat 1852.785 kb on - strand, within zapEat 1852.785 kb on - strand, within zapEat 1852.785 kb on - strand, within zapEat 1852.785 kb on - strand, within zapEat 1852.785 kb on - strand, within zapEat 1852.785 kb on - strand, within zapEat 1852.785 kb on - strand, within zapEat 1852.785 kb on - strand, within zapEat 1852.785 kb on - strand, within zapEat 1852.785 kb on - strand, within zapEat 1852.785 kb on - strand, within zapEat 1852.785 kb on - strand, within zapEat 1852.785 kb on - strand, within zapEat 1852.785 kb on - strand, within zapEat 1852.786 kb on + strand, within zapEat 1852.786 kb on + strand, within zapEat 1852.786 kb on + strand, within zapEat 1852.786 kb on + strand, within zapEat 1852.786 kb on + strand, within zapEat 1852.786 kb on + strand, within zapEat 1852.786 kb on + strand, within zapEat 1852.786 kb on + strand, within zapEat 1852.786 kb on + strand, within zapEat 1852.786 kb on + strand, within zapEat 1852.786 kb on + strand, within zapEat 1852.786 kb on + strand, within zapEat 1852.787 kb on - strand, within zapEat 1852.787 kb on - strand, within zapEat 1852.787 kb on - strand, within zapEat 1852.787 kb on - strand, within zapEat 1852.787 kb on - strand, within zapEat 1852.787 kb on - strand, within zapEat 1852.787 kb on - strand, within zapEat 1852.787 kb on - strand, within zapEat 1852.787 kb on - strand, within zapEat 1852.787 kb on - strand, within zapEat 1852.787 kb on - strand, within zapEat 1852.835 kb on + strand, within zapEat 1852.885 kb on + strand, within zapEat 1852.885 kb on + strand, within zapEat 1852.886 kb on - strand, within zapEat 1852.908 kb on + strand, within zapEat 1852.909 kb on - strand, within zapEat 1852.909 kb on - strand, within zapEat 1853.008 kb on + strand, within zapEat 1853.025 kb on + strand, within zapEat 1853.026 kb on - strand, within zapEat 1853.026 kb on - strand, within zapEat 1853.026 kb on - strand, within zapEat 1853.086 kb on + strand, within zapEat 1853.172 kb on + strand, within zapEat 1853.173 kb on - strand, within zapEat 1853.173 kb on - strand, within zapEat 1853.173 kb on - strand, within zapEat 1853.209 kb on + strand, within zapEat 1853.209 kb on + strand, within zapEat 1853.210 kb on - strand, within zapEat 1853.210 kb on - strand, within zapEat 1853.210 kb on - strand, within zapEat 1853.210 kb on - strand, within zapEat 1853.277 kb on + strand, within zapEat 1853.277 kb on + strand, within zapEat 1853.277 kb on + strand, within zapEat 1853.277 kb on + strand, within zapEat 1853.277 kb on + strand, within zapEat 1853.278 kb on - strand, within zapEat 1853.278 kb on - strand, within zapE

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas67
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1,851,069 + degQ NOLOHH_09605 0.45 -0.0
1,851,070 - degQ NOLOHH_09605 0.45 +1.1
1,851,072 + degQ NOLOHH_09605 0.46 +0.5
1,851,142 + degQ NOLOHH_09605 0.51 -0.0
1,851,142 + degQ NOLOHH_09605 0.51 +1.3
1,851,143 - degQ NOLOHH_09605 0.51 -0.5
1,851,143 - degQ NOLOHH_09605 0.51 -0.1
1,851,160 + degQ NOLOHH_09605 0.52 +0.3
1,851,160 + degQ NOLOHH_09605 0.52 +0.1
1,851,161 - degQ NOLOHH_09605 0.52 +2.1
1,851,161 - degQ NOLOHH_09605 0.52 -0.0
1,851,163 + degQ NOLOHH_09605 0.52 -0.1
1,851,250 + degQ NOLOHH_09605 0.59 +0.6
1,851,462 + degQ NOLOHH_09605 0.74 -0.9
1,851,484 - degQ NOLOHH_09605 0.76 +0.2
1,851,510 - degQ NOLOHH_09605 0.78 -1.1
1,851,544 + degQ NOLOHH_09605 0.80 -0.0
1,851,545 - degQ NOLOHH_09605 0.80 -0.4
1,851,649 + degQ NOLOHH_09605 0.88 +1.2
1,851,778 + +0.9
1,851,832 - +0.5
1,851,843 - -1.6
1,851,911 - -0.0
1,851,966 + -0.2
1,851,991 - -0.1
1,852,184 - zapG NOLOHH_09610 0.54 -1.5
1,852,246 - zapG NOLOHH_09610 0.69 +1.5
1,852,262 + zapG NOLOHH_09610 0.73 -0.7
1,852,262 + zapG NOLOHH_09610 0.73 +1.8
1,852,285 + zapG NOLOHH_09610 0.79 +0.5
1,852,286 - zapG NOLOHH_09610 0.79 -0.3
1,852,290 + zapG NOLOHH_09610 0.80 +0.8
1,852,291 - zapG NOLOHH_09610 0.80 -1.9
1,852,296 + zapG NOLOHH_09610 0.82 -0.8
1,852,356 - -0.9
1,852,356 - -2.2
1,852,356 - -0.7
1,852,442 + -1.2
1,852,442 + +0.1
1,852,443 - +1.0
1,852,493 + -0.2
1,852,549 + -0.3
1,852,663 + -1.5
1,852,668 - -0.2
1,852,684 + zapE NOLOHH_09615 0.11 -0.6
1,852,685 - zapE NOLOHH_09615 0.11 -0.8
1,852,765 + zapE NOLOHH_09615 0.18 -0.9
1,852,765 + zapE NOLOHH_09615 0.18 +0.5
1,852,766 - zapE NOLOHH_09615 0.18 -1.0
1,852,766 - zapE NOLOHH_09615 0.18 -1.1
1,852,782 + zapE NOLOHH_09615 0.20 +0.2
1,852,782 + zapE NOLOHH_09615 0.20 -0.7
1,852,782 + zapE NOLOHH_09615 0.20 -0.4
1,852,783 - zapE NOLOHH_09615 0.20 -0.4
1,852,783 - zapE NOLOHH_09615 0.20 +0.5
1,852,783 - zapE NOLOHH_09615 0.20 -0.1
1,852,783 - zapE NOLOHH_09615 0.20 +2.1
1,852,783 - zapE NOLOHH_09615 0.20 -0.1
1,852,783 - zapE NOLOHH_09615 0.20 -0.1
1,852,783 - zapE NOLOHH_09615 0.20 -1.5
1,852,784 + zapE NOLOHH_09615 0.20 -1.5
1,852,784 + zapE NOLOHH_09615 0.20 -0.3
1,852,784 + zapE NOLOHH_09615 0.20 +0.1
1,852,784 + zapE NOLOHH_09615 0.20 +0.1
1,852,784 + zapE NOLOHH_09615 0.20 -0.1
1,852,784 + zapE NOLOHH_09615 0.20 -0.6
1,852,784 + zapE NOLOHH_09615 0.20 -0.9
1,852,784 + zapE NOLOHH_09615 0.20 -0.0
1,852,784 + zapE NOLOHH_09615 0.20 +0.3
1,852,784 + zapE NOLOHH_09615 0.20 -0.3
1,852,784 + zapE NOLOHH_09615 0.20 -1.2
1,852,784 + zapE NOLOHH_09615 0.20 -0.5
1,852,784 + zapE NOLOHH_09615 0.20 -1.1
1,852,784 + zapE NOLOHH_09615 0.20 -0.1
1,852,784 + zapE NOLOHH_09615 0.20 -0.2
1,852,784 + zapE NOLOHH_09615 0.20 +0.3
1,852,785 - zapE NOLOHH_09615 0.20 -0.7
1,852,785 - zapE NOLOHH_09615 0.20 -0.3
1,852,785 - zapE NOLOHH_09615 0.20 -0.1
1,852,785 - zapE NOLOHH_09615 0.20 -0.5
1,852,785 - zapE NOLOHH_09615 0.20 +0.3
1,852,785 - zapE NOLOHH_09615 0.20 +0.5
1,852,785 - zapE NOLOHH_09615 0.20 +0.9
1,852,785 - zapE NOLOHH_09615 0.20 -1.1
1,852,785 - zapE NOLOHH_09615 0.20 +1.5
1,852,785 - zapE NOLOHH_09615 0.20 +0.7
1,852,785 - zapE NOLOHH_09615 0.20 -1.1
1,852,785 - zapE NOLOHH_09615 0.20 +1.3
1,852,785 - zapE NOLOHH_09615 0.20 -0.4
1,852,785 - zapE NOLOHH_09615 0.20 -1.4
1,852,786 + zapE NOLOHH_09615 0.20 +0.1
1,852,786 + zapE NOLOHH_09615 0.20 -0.5
1,852,786 + zapE NOLOHH_09615 0.20 +0.5
1,852,786 + zapE NOLOHH_09615 0.20 -1.4
1,852,786 + zapE NOLOHH_09615 0.20 -0.9
1,852,786 + zapE NOLOHH_09615 0.20 -0.5
1,852,786 + zapE NOLOHH_09615 0.20 +1.2
1,852,786 + zapE NOLOHH_09615 0.20 -0.9
1,852,786 + zapE NOLOHH_09615 0.20 -0.5
1,852,786 + zapE NOLOHH_09615 0.20 +0.3
1,852,786 + zapE NOLOHH_09615 0.20 -0.2
1,852,786 + zapE NOLOHH_09615 0.20 +0.8
1,852,787 - zapE NOLOHH_09615 0.20 +1.1
1,852,787 - zapE NOLOHH_09615 0.20 +0.9
1,852,787 - zapE NOLOHH_09615 0.20 +0.2
1,852,787 - zapE NOLOHH_09615 0.20 -0.7
1,852,787 - zapE NOLOHH_09615 0.20 -0.4
1,852,787 - zapE NOLOHH_09615 0.20 -0.5
1,852,787 - zapE NOLOHH_09615 0.20 -1.1
1,852,787 - zapE NOLOHH_09615 0.20 +0.2
1,852,787 - zapE NOLOHH_09615 0.20 -0.0
1,852,787 - zapE NOLOHH_09615 0.20 -0.2
1,852,787 - zapE NOLOHH_09615 0.20 -1.0
1,852,835 + zapE NOLOHH_09615 0.24 -0.2
1,852,885 + zapE NOLOHH_09615 0.29 -0.6
1,852,885 + zapE NOLOHH_09615 0.29 +0.5
1,852,886 - zapE NOLOHH_09615 0.29 -0.4
1,852,908 + zapE NOLOHH_09615 0.31 -0.7
1,852,909 - zapE NOLOHH_09615 0.31 -0.0
1,852,909 - zapE NOLOHH_09615 0.31 -1.6
1,853,008 + zapE NOLOHH_09615 0.40 -0.5
1,853,025 + zapE NOLOHH_09615 0.41 -0.8
1,853,026 - zapE NOLOHH_09615 0.41 -0.9
1,853,026 - zapE NOLOHH_09615 0.41 +0.8
1,853,026 - zapE NOLOHH_09615 0.41 -0.3
1,853,086 + zapE NOLOHH_09615 0.46 -0.0
1,853,172 + zapE NOLOHH_09615 0.54 -0.5
1,853,173 - zapE NOLOHH_09615 0.54 -0.5
1,853,173 - zapE NOLOHH_09615 0.54 +0.8
1,853,173 - zapE NOLOHH_09615 0.54 -1.1
1,853,209 + zapE NOLOHH_09615 0.57 -0.1
1,853,209 + zapE NOLOHH_09615 0.57 -0.9
1,853,210 - zapE NOLOHH_09615 0.57 +0.4
1,853,210 - zapE NOLOHH_09615 0.57 +0.5
1,853,210 - zapE NOLOHH_09615 0.57 -0.3
1,853,210 - zapE NOLOHH_09615 0.57 -0.4
1,853,277 + zapE NOLOHH_09615 0.63 -1.1
1,853,277 + zapE NOLOHH_09615 0.63 +0.7
1,853,277 + zapE NOLOHH_09615 0.63 -0.5
1,853,277 + zapE NOLOHH_09615 0.63 -1.5
1,853,277 + zapE NOLOHH_09615 0.63 -0.6
1,853,278 - zapE NOLOHH_09615 0.63 -2.1
1,853,278 - zapE NOLOHH_09615 0.63 +0.5

Or see this region's nucleotide sequence