Experiment: Bas67
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt arsB and arsR are separated by 53 nucleotides arsR and NOLOHH_08335 are separated by 538 nucleotides NOLOHH_08335 and gorA are separated by 164 nucleotides
NOLOHH_08315: arsB - arsenite/antimonite:H(+) antiporter ArsB, at 1,603,081 to 1,604,370
arsB
NOLOHH_08320: arsR - As(III)-sensing metalloregulatory transcriptional repressor ArsR, at 1,604,424 to 1,604,777
arsR
NOLOHH_08335: NOLOHH_08335 - hypothetical protein, at 1,605,316 to 1,605,489
_08335
NOLOHH_08340: gorA - glutathione-disulfide reductase, at 1,605,654 to 1,607,006
gorA
Position (kb)
1604
1605 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1603.447 kb on + strand, within arsB at 1603.448 kb on - strand, within arsB at 1603.448 kb on - strand, within arsB at 1603.460 kb on + strand, within arsB at 1603.461 kb on - strand, within arsB at 1603.461 kb on - strand, within arsB at 1603.502 kb on + strand, within arsB at 1603.502 kb on + strand, within arsB at 1603.503 kb on - strand, within arsB at 1603.503 kb on - strand, within arsB at 1603.503 kb on - strand, within arsB at 1603.503 kb on - strand, within arsB at 1603.503 kb on - strand, within arsB at 1603.503 kb on - strand, within arsB at 1603.503 kb on - strand, within arsB at 1603.503 kb on - strand, within arsB at 1603.561 kb on - strand, within arsB at 1603.561 kb on - strand, within arsB at 1603.594 kb on + strand, within arsB at 1603.594 kb on + strand, within arsB at 1603.594 kb on + strand, within arsB at 1603.595 kb on - strand, within arsB at 1603.598 kb on - strand, within arsB at 1603.598 kb on - strand, within arsB at 1603.679 kb on - strand, within arsB at 1603.704 kb on + strand, within arsB at 1603.704 kb on + strand, within arsB at 1603.705 kb on - strand, within arsB at 1603.705 kb on - strand, within arsB at 1603.754 kb on + strand, within arsB at 1603.755 kb on - strand, within arsB at 1603.755 kb on - strand, within arsB at 1603.755 kb on - strand, within arsB at 1603.767 kb on + strand, within arsB at 1603.767 kb on + strand, within arsB at 1603.767 kb on + strand, within arsB at 1603.767 kb on + strand, within arsB at 1603.768 kb on - strand, within arsB at 1603.781 kb on + strand, within arsB at 1603.781 kb on + strand, within arsB at 1603.789 kb on + strand, within arsB at 1603.789 kb on + strand, within arsB at 1603.789 kb on + strand, within arsB at 1603.789 kb on + strand, within arsB at 1603.789 kb on + strand, within arsB at 1603.789 kb on + strand, within arsB at 1603.789 kb on + strand, within arsB at 1603.789 kb on + strand, within arsB at 1603.789 kb on + strand, within arsB at 1603.789 kb on + strand, within arsB at 1603.789 kb on + strand, within arsB at 1603.789 kb on + strand, within arsB at 1603.790 kb on - strand, within arsB at 1603.790 kb on - strand, within arsB at 1603.790 kb on - strand, within arsB at 1603.790 kb on - strand, within arsB at 1603.790 kb on - strand, within arsB at 1603.790 kb on - strand, within arsB at 1603.790 kb on - strand, within arsB at 1603.790 kb on - strand, within arsB at 1603.790 kb on - strand, within arsB at 1603.790 kb on - strand, within arsB at 1603.848 kb on - strand, within arsB at 1603.908 kb on + strand, within arsB at 1603.909 kb on - strand, within arsB at 1603.965 kb on + strand, within arsB at 1603.974 kb on + strand, within arsB at 1603.985 kb on - strand, within arsB at 1604.179 kb on - strand, within arsB at 1604.235 kb on + strand, within arsB at 1604.263 kb on + strand at 1604.263 kb on + strand at 1604.325 kb on + strand at 1604.326 kb on - strand at 1604.332 kb on + strand at 1604.333 kb on - strand at 1604.370 kb on + strand at 1604.371 kb on - strand at 1604.371 kb on - strand at 1604.579 kb on + strand, within arsR at 1604.580 kb on - strand, within arsR at 1604.580 kb on - strand, within arsR at 1604.601 kb on + strand, within arsR at 1604.601 kb on + strand, within arsR at 1604.602 kb on - strand, within arsR at 1604.685 kb on + strand, within arsR at 1604.685 kb on + strand, within arsR at 1604.777 kb on + strand at 1604.777 kb on + strand at 1604.778 kb on - strand at 1604.778 kb on - strand at 1604.778 kb on - strand at 1604.778 kb on - strand at 1604.778 kb on - strand at 1604.801 kb on + strand at 1604.824 kb on - strand at 1604.875 kb on + strand at 1604.876 kb on - strand at 1604.929 kb on + strand at 1604.958 kb on - strand at 1605.005 kb on + strand at 1605.005 kb on + strand at 1605.006 kb on - strand at 1605.006 kb on - strand at 1605.006 kb on - strand at 1605.009 kb on + strand at 1605.020 kb on + strand at 1605.021 kb on - strand at 1605.023 kb on + strand at 1605.023 kb on + strand at 1605.023 kb on + strand at 1605.024 kb on - strand at 1605.024 kb on - strand at 1605.024 kb on - strand at 1605.037 kb on + strand at 1605.053 kb on - strand at 1605.090 kb on + strand at 1605.090 kb on + strand at 1605.091 kb on - strand at 1605.091 kb on - strand at 1605.091 kb on - strand at 1605.092 kb on + strand at 1605.093 kb on - strand at 1605.108 kb on + strand at 1605.108 kb on + strand at 1605.108 kb on + strand at 1605.108 kb on + strand at 1605.108 kb on + strand at 1605.108 kb on + strand at 1605.108 kb on + strand at 1605.109 kb on - strand at 1605.109 kb on - strand at 1605.109 kb on - strand at 1605.110 kb on + strand at 1605.111 kb on - strand at 1605.112 kb on + strand at 1605.112 kb on + strand at 1605.112 kb on + strand at 1605.113 kb on - strand at 1605.113 kb on - strand at 1605.135 kb on - strand at 1605.138 kb on - strand at 1605.138 kb on - strand at 1605.293 kb on + strand at 1605.295 kb on + strand at 1605.307 kb on - strand at 1605.307 kb on - strand at 1605.311 kb on + strand at 1605.312 kb on - strand at 1605.312 kb on - strand at 1605.326 kb on - strand at 1605.359 kb on + strand, within NOLOHH_08335 at 1605.359 kb on + strand, within NOLOHH_08335 at 1605.360 kb on - strand, within NOLOHH_08335 at 1605.360 kb on - strand, within NOLOHH_08335 at 1605.387 kb on + strand, within NOLOHH_08335 at 1605.435 kb on + strand, within NOLOHH_08335 at 1605.436 kb on - strand, within NOLOHH_08335 at 1605.439 kb on + strand, within NOLOHH_08335 at 1605.439 kb on + strand, within NOLOHH_08335 at 1605.439 kb on + strand, within NOLOHH_08335 at 1605.439 kb on + strand, within NOLOHH_08335 at 1605.439 kb on + strand, within NOLOHH_08335 at 1605.440 kb on - strand, within NOLOHH_08335 at 1605.440 kb on - strand, within NOLOHH_08335 at 1605.445 kb on + strand, within NOLOHH_08335 at 1605.526 kb on - strand at 1605.612 kb on + strand at 1605.612 kb on + strand at 1605.613 kb on - strand at 1605.613 kb on - strand at 1605.613 kb on - strand at 1605.617 kb on - strand at 1605.617 kb on - strand at 1605.617 kb on - strand at 1605.623 kb on + strand at 1605.634 kb on + strand at 1605.634 kb on + strand at 1605.774 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas67 remove 1,603,447 + arsB NOLOHH_08315 0.28 +0.6 1,603,448 - arsB NOLOHH_08315 0.28 -0.7 1,603,448 - arsB NOLOHH_08315 0.28 +0.6 1,603,460 + arsB NOLOHH_08315 0.29 +0.1 1,603,461 - arsB NOLOHH_08315 0.29 -0.4 1,603,461 - arsB NOLOHH_08315 0.29 +0.9 1,603,502 + arsB NOLOHH_08315 0.33 -0.7 1,603,502 + arsB NOLOHH_08315 0.33 +0.4 1,603,503 - arsB NOLOHH_08315 0.33 -0.4 1,603,503 - arsB NOLOHH_08315 0.33 -0.6 1,603,503 - arsB NOLOHH_08315 0.33 -1.5 1,603,503 - arsB NOLOHH_08315 0.33 +0.1 1,603,503 - arsB NOLOHH_08315 0.33 -0.5 1,603,503 - arsB NOLOHH_08315 0.33 +0.5 1,603,503 - arsB NOLOHH_08315 0.33 -0.8 1,603,503 - arsB NOLOHH_08315 0.33 +0.0 1,603,561 - arsB NOLOHH_08315 0.37 -0.6 1,603,561 - arsB NOLOHH_08315 0.37 -0.1 1,603,594 + arsB NOLOHH_08315 0.40 +0.0 1,603,594 + arsB NOLOHH_08315 0.40 -0.2 1,603,594 + arsB NOLOHH_08315 0.40 -1.2 1,603,595 - arsB NOLOHH_08315 0.40 +0.5 1,603,598 - arsB NOLOHH_08315 0.40 -0.7 1,603,598 - arsB NOLOHH_08315 0.40 +0.4 1,603,679 - arsB NOLOHH_08315 0.46 +1.5 1,603,704 + arsB NOLOHH_08315 0.48 -0.1 1,603,704 + arsB NOLOHH_08315 0.48 -1.2 1,603,705 - arsB NOLOHH_08315 0.48 +0.0 1,603,705 - arsB NOLOHH_08315 0.48 +1.5 1,603,754 + arsB NOLOHH_08315 0.52 -0.2 1,603,755 - arsB NOLOHH_08315 0.52 -0.3 1,603,755 - arsB NOLOHH_08315 0.52 +0.9 1,603,755 - arsB NOLOHH_08315 0.52 -2.3 1,603,767 + arsB NOLOHH_08315 0.53 +0.4 1,603,767 + arsB NOLOHH_08315 0.53 -0.5 1,603,767 + arsB NOLOHH_08315 0.53 +1.4 1,603,767 + arsB NOLOHH_08315 0.53 +0.6 1,603,768 - arsB NOLOHH_08315 0.53 -0.9 1,603,781 + arsB NOLOHH_08315 0.54 -0.5 1,603,781 + arsB NOLOHH_08315 0.54 +0.2 1,603,789 + arsB NOLOHH_08315 0.55 +0.5 1,603,789 + arsB NOLOHH_08315 0.55 -0.5 1,603,789 + arsB NOLOHH_08315 0.55 -0.9 1,603,789 + arsB NOLOHH_08315 0.55 +0.3 1,603,789 + arsB NOLOHH_08315 0.55 +0.3 1,603,789 + arsB NOLOHH_08315 0.55 -2.1 1,603,789 + arsB NOLOHH_08315 0.55 +1.0 1,603,789 + arsB NOLOHH_08315 0.55 -0.9 1,603,789 + arsB NOLOHH_08315 0.55 -0.1 1,603,789 + arsB NOLOHH_08315 0.55 -0.6 1,603,789 + arsB NOLOHH_08315 0.55 -0.5 1,603,789 + arsB NOLOHH_08315 0.55 +0.5 1,603,790 - arsB NOLOHH_08315 0.55 -0.7 1,603,790 - arsB NOLOHH_08315 0.55 -1.8 1,603,790 - arsB NOLOHH_08315 0.55 -1.1 1,603,790 - arsB NOLOHH_08315 0.55 +1.0 1,603,790 - arsB NOLOHH_08315 0.55 -1.0 1,603,790 - arsB NOLOHH_08315 0.55 +0.4 1,603,790 - arsB NOLOHH_08315 0.55 +0.5 1,603,790 - arsB NOLOHH_08315 0.55 -0.4 1,603,790 - arsB NOLOHH_08315 0.55 +0.3 1,603,790 - arsB NOLOHH_08315 0.55 -0.2 1,603,848 - arsB NOLOHH_08315 0.59 -1.0 1,603,908 + arsB NOLOHH_08315 0.64 +0.7 1,603,909 - arsB NOLOHH_08315 0.64 +0.4 1,603,965 + arsB NOLOHH_08315 0.69 +0.5 1,603,974 + arsB NOLOHH_08315 0.69 -0.7 1,603,985 - arsB NOLOHH_08315 0.70 -1.4 1,604,179 - arsB NOLOHH_08315 0.85 +0.8 1,604,235 + arsB NOLOHH_08315 0.89 -0.0 1,604,263 + -0.3 1,604,263 + +0.7 1,604,325 + -0.8 1,604,326 - -0.7 1,604,332 + +0.1 1,604,333 - +0.2 1,604,370 + -1.6 1,604,371 - -0.1 1,604,371 - +0.2 1,604,579 + arsR NOLOHH_08320 0.44 -0.4 1,604,580 - arsR NOLOHH_08320 0.44 -1.1 1,604,580 - arsR NOLOHH_08320 0.44 -0.3 1,604,601 + arsR NOLOHH_08320 0.50 +0.0 1,604,601 + arsR NOLOHH_08320 0.50 +2.5 1,604,602 - arsR NOLOHH_08320 0.50 +0.5 1,604,685 + arsR NOLOHH_08320 0.74 +0.6 1,604,685 + arsR NOLOHH_08320 0.74 +0.1 1,604,777 + +0.8 1,604,777 + +0.0 1,604,778 - +0.2 1,604,778 - -0.6 1,604,778 - +0.8 1,604,778 - +0.5 1,604,778 - +2.0 1,604,801 + +0.1 1,604,824 - +0.3 1,604,875 + -1.5 1,604,876 - -0.2 1,604,929 + -0.7 1,604,958 - +0.0 1,605,005 + -0.3 1,605,005 + +0.3 1,605,006 - +0.5 1,605,006 - -0.2 1,605,006 - +0.2 1,605,009 + +0.4 1,605,020 + -0.3 1,605,021 - -2.3 1,605,023 + +1.5 1,605,023 + +0.7 1,605,023 + +0.1 1,605,024 - -2.3 1,605,024 - -1.7 1,605,024 - -0.0 1,605,037 + +0.9 1,605,053 - -0.5 1,605,090 + +0.3 1,605,090 + +0.2 1,605,091 - +0.8 1,605,091 - -0.3 1,605,091 - +0.5 1,605,092 + -0.8 1,605,093 - +0.5 1,605,108 + +0.4 1,605,108 + +1.2 1,605,108 + -0.4 1,605,108 + +1.2 1,605,108 + +1.1 1,605,108 + -0.9 1,605,108 + +0.4 1,605,109 - +1.2 1,605,109 - +0.5 1,605,109 - -0.5 1,605,110 + -0.2 1,605,111 - -0.4 1,605,112 + -0.3 1,605,112 + +1.3 1,605,112 + -0.5 1,605,113 - -0.2 1,605,113 - -0.4 1,605,135 - -0.3 1,605,138 - -1.1 1,605,138 - +0.5 1,605,293 + -0.2 1,605,295 + -0.4 1,605,307 - +0.8 1,605,307 - -0.1 1,605,311 + -0.5 1,605,312 - -1.4 1,605,312 - -0.9 1,605,326 - -0.5 1,605,359 + NOLOHH_08335 0.25 +1.4 1,605,359 + NOLOHH_08335 0.25 +0.4 1,605,360 - NOLOHH_08335 0.25 +0.1 1,605,360 - NOLOHH_08335 0.25 +0.7 1,605,387 + NOLOHH_08335 0.41 +0.6 1,605,435 + NOLOHH_08335 0.68 +0.0 1,605,436 - NOLOHH_08335 0.69 -0.5 1,605,439 + NOLOHH_08335 0.71 -0.2 1,605,439 + NOLOHH_08335 0.71 -0.3 1,605,439 + NOLOHH_08335 0.71 +0.6 1,605,439 + NOLOHH_08335 0.71 -0.1 1,605,439 + NOLOHH_08335 0.71 -0.1 1,605,440 - NOLOHH_08335 0.71 -0.1 1,605,440 - NOLOHH_08335 0.71 +0.6 1,605,445 + NOLOHH_08335 0.74 -0.5 1,605,526 - -0.3 1,605,612 + -0.2 1,605,612 + -0.6 1,605,613 - -1.5 1,605,613 - -0.4 1,605,613 - +0.2 1,605,617 - -0.8 1,605,617 - -0.7 1,605,617 - -1.1 1,605,623 + +0.0 1,605,634 + +0.7 1,605,634 + +1.7 1,605,774 - +0.8
Or see this region's nucleotide sequence